RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 METTL13Q8N6R0 699 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 MRFAP1L1Q96HT8 127 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 C2orf40Q9H1Z8 148 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 SUCLA2Q9P2R7 463 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-208ENST00000553868 LIMA1Q9UHB6 759 aaKnown RBP15.78■□□□□ 0.12
SHMT2-208ENST00000553868 TBX20Q9UMR3 447 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 TTC3P53804 2025 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 C17orf102A2RUQ5 167 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 LRRIQ4A6NIV6 560 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 DGKIO75912 1065 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 SMIM10L2AP0DMW4 78 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 SMIM10L2BP0DMW5 78 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 CDC25BP30305 580 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 CDC42EP1Q00587 391 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 SYCE2Q6PIF2 218 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 MTHFD1LQ6UB35 978 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 FILIP1Q7Z7B0 1213 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 CCDC105Q8IYK2 499 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 ASAP3Q8TDY4 903 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 MICAL1Q8TDZ2 1067 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 TRAPPC12Q8WVT3 735 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 PRPF31Q8WWY3 499 aaKnown RBP15.77■□□□□ 0.12
SHMT2-208ENST00000553868 BSNDQ8WZ55 320 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 APBB2Q92870 758 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 TMEM134Q9H6X4 195 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 IFNKQ9P0W0 207 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 ARHGAP28Q9P2N2 729 aa15.77■□□□□ 0.12
SHMT2-208ENST00000553868 GOLGA6L6A8MZA4 724 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 ENPP3O14638 875 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 NR3C1P04150 777 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 GHRP10912 638 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 NPR3P17342 541 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 NR2F2P24468 414 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 HOXD13P35453 343 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 MTIF2P46199 727 aaKnown RBP15.76■□□□□ 0.11
SHMT2-208ENST00000553868 POU5F1BQ06416 359 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 LAMTOR4Q0VGL1 99 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 ADAM9Q13443 819 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 HSP90AA4PQ58FG1 418 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 LLGL2Q6P1M3 1020 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 LRRC55Q6ZSA7 311 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 MAP4K3Q8IVH8 894 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 C12orf56Q8IXR9 622 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 ZC3H3Q8IXZ2 948 aaKnown RBP15.76■□□□□ 0.11
SHMT2-208ENST00000553868 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 LRRC71Q8N4P6 559 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 DTWD2Q8NBA8 298 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 CNOT6LQ96LI5 555 aaKnown RBP15.76■□□□□ 0.11
SHMT2-208ENST00000553868 PPP1R9BQ96SB3 815 aa15.76■□□□□ 0.11
SHMT2-208ENST00000553868 GPR179Q6PRD1 2367 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 LRRC10BA6NIK2 292 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 K7ERI5 159 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 SLC16A3O15427 465 aaKnown RBP15.75■□□□□ 0.11
SHMT2-208ENST00000553868 TGFB1I1O43294 461 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 AP5Z1O43299 807 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 PHKA2P46019 1235 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 GATMP50440 423 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 CLCN3P51790 818 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 CAPSQ13938 189 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 KRT31Q15323 416 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 DUSP6Q16828 381 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 CCDC40Q4G0X9 1142 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 ANKRD54Q6NXT1 300 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 SLC9A9Q8IVB4 645 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 DRC7Q8IY82 874 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 TMEM174Q8WUU8 243 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 BICD1Q96G01 975 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 XPO4Q9C0E2 1151 aaKnown RBP15.75■□□□□ 0.11
SHMT2-208ENST00000553868 METTL14Q9HCE5 456 aaKnown RBP15.75■□□□□ 0.11
SHMT2-208ENST00000553868 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 MYH11P35749 1972 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 ZMYM2Q9UBW7 1377 aa15.75■□□□□ 0.11
SHMT2-208ENST00000553868 N4BP3O15049 544 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 CHRNA1P02708 482 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 RPLP2P05387 115 aaKnown RBP15.74■□□□□ 0.11
SHMT2-208ENST00000553868 EPB41P11171 864 aaKnown RBP15.74■□□□□ 0.11
SHMT2-208ENST00000553868 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-208ENST00000553868 AOC1P19801 751 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 HOXC8P31273 242 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 COPB1P53618 953 aaKnown RBP15.74■□□□□ 0.11
SHMT2-208ENST00000553868 ERVFC1P60507 584 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 PPP2R3AQ06190 1150 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 KCNA1Q09470 495 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 CDCA2Q69YH5 1023 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-208ENST00000553868 IRF2BP1Q8IU81 584 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 RHPN2Q8IUC4 686 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 LINC01465Q8N7H1 131 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 RIN2Q8WYP3 895 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-208ENST00000553868 MKNK1Q9BUB5 465 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 KIFC3Q9BVG8 833 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 NFKBIZQ9BYH8 718 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 POMKQ9H5K3 350 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 SETD4Q9NVD3 440 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 AKT3Q9Y243 479 aa15.74■□□□□ 0.11
SHMT2-208ENST00000553868 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms