RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ID4P47928 161 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 ARPP19P56211 112 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 OSTNP61366 133 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 HMGN5P82970 282 aaKnown RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 PFKPQ01813 784 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 EEF1DP3Q658K8 133 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 LILRA6Q6PI73 481 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 ANKS3Q6ZW76 656 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 ELMOD1Q8N336 334 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 LNX1Q8TBB1 728 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 CLSTN3Q9BQT9 956 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 FOXQ1Q9C009 403 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 FOXP1Q9H334 677 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 DDX19AQ9NUU7 478 aaKnown RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 SLC38A7Q9NVC3 462 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 SPATA6Q9NWH7 488 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 KIAA1024Q9UPX6 916 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 MRPS23Q9Y3D9 190 aaKnown RBP10.88□□□□□ -0.67
ACTN1-210ENST00000553779 KIF26AQ9ULI4 1882 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-210ENST00000553779 TTLL13PA6NNM8 815 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 ANHXE9PGG2 379 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 I3L4J1 428 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 MUTP22033 750 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 TKTP29401 623 aaKnown RBP10.87□□□□□ -0.67
ACTN1-210ENST00000553779 HOXA9P31269 272 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 CLCNKBP51801 687 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 PEX3P56589 373 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 STRN3Q13033 797 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 SNW1Q13573 536 aaKnown RBP10.87□□□□□ -0.67
ACTN1-210ENST00000553779 MLF2Q15773 248 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-210ENST00000553779 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 PHLDB3Q6NSJ2 640 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 PARM1Q6UWI2 310 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 PJA1Q8NG27 643 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 FGF13Q92913 245 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 FGF14Q92915 247 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 DRC1Q96MC2 740 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 MRPL4Q9BYD3 311 aaKnown RBP10.87□□□□□ -0.67
ACTN1-210ENST00000553779 CCDC113Q9H0I3 377 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 KMT5AQ9NQR1 393 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 SLC2A4RGQ9NR83 387 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 PPP4R2Q9NY27 417 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 ANKFY1Q9P2R3 1169 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 DNM3Q9UQ16 869 aa10.87□□□□□ -0.67
ACTN1-210ENST00000553779 TPRP12270 2363 aaKnown RBP10.86□□□□□ -0.67
ACTN1-210ENST00000553779 PODXLO00592 558 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 ADAM12O43184 909 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 LAMTOR5O43504 91 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 KINO60870 393 aaKnown RBP10.86□□□□□ -0.67
ACTN1-210ENST00000553779 MCM4P33991 863 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 GPC5P78333 572 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 MCTP1Q6DN14 999 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 C1orf210Q8IVY1 113 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 KIAA2013Q8IYS2 634 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 ITFG1Q8TB96 612 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 BICD1Q96G01 975 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 DDX27Q96GQ7 796 aaKnown RBP10.86□□□□□ -0.67
ACTN1-210ENST00000553779 CDK5RAP3Q96JB5 506 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 LLPHQ9BRT6 129 aaKnown RBP10.86□□□□□ -0.67
ACTN1-210ENST00000553779 HCFC1R1Q9NWW0 138 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 MTRRQ9UBK8 725 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-210ENST00000553779 KCNH3Q9ULD8 1083 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 KIF3AQ9Y496 699 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 ATG2BQ96BY7 2078 aa10.86□□□□□ -0.67
ACTN1-210ENST00000553779 GPR179Q6PRD1 2367 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 NUP210Q8TEM1 1887 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 KANSL1LA0AUZ9 987 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 H7C4K7 107 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 TMEM189-UBE2V1I3L0A0 370 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 HIP1RO75146 1068 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 SP9P0CG40 484 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 CPB1P15086 417 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 FGFR3P22607 806 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 BRCC3P46736 316 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 PRKCQQ04759 706 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 RAB33AQ14088 237 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 NBR1Q14596 966 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 IQCEQ6IPM2 695 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 TPRG1Q6ZUI0 275 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 MCRS1Q96EZ8 462 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 ZSCAN31Q96LW9 406 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 ACAP3Q96P50 834 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 PPP1R10Q96QC0 940 aaKnown RBP10.85□□□□□ -0.67
ACTN1-210ENST00000553779 CORO1BQ9BR76 489 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 CDT1Q9H211 546 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 CXCL16Q9H2A7 254 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
ACTN1-210ENST00000553779 CYP4F11Q9HBI6 524 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms