RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SLC39A11Q8N1S5 342 aa15.03■□□□□ -0
TUBB3-202ENST00000553656 RDH13Q8NBN7 331 aa15.03■□□□□ -0
TUBB3-202ENST00000553656 DDX27Q96GQ7 796 aaKnown RBP15.03■□□□□ -0
TUBB3-202ENST00000553656 DHTKD1Q96HY7 919 aaPredicted RBP15.03■□□□□ -0
TUBB3-202ENST00000553656 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
TUBB3-202ENST00000553656 CXCL16Q9H2A7 254 aa15.03■□□□□ -0
TUBB3-202ENST00000553656 UBQLN1Q9UMX0 589 aaKnown RBP15.03■□□□□ -0
TUBB3-202ENST00000553656 DERAQ9Y315 318 aa15.03■□□□□ -0
TUBB3-202ENST00000553656 BICDL2A1A5D9 508 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 NT5C1B-RDH14C9J2C7 533 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 NRP1O14786 923 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 B4GALT3O60512 393 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 NR2F2P24468 414 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 UBE3AQ05086 875 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 LRRC63Q05C16 580 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 BMS1Q14692 1282 aaKnown RBP15.02■□□□□ -0
TUBB3-202ENST00000553656 NFIL3Q16649 462 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 EDRF1Q3B7T1 1238 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 JADE1Q6IE81 842 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 NT5DC4Q86YG4 428 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 BEST2Q8NFU1 509 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 IGSF21Q96ID5 467 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 FBXL18Q96ME1 805 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 FNBP1Q96RU3 617 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 LMAN2LQ9H0V9 348 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 STK39Q9UEW8 545 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 DACH1Q9UI36 760 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 C2CD2Q9Y426 696 aa15.02■□□□□ -0
TUBB3-202ENST00000553656 EPOPA6NHQ4 379 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 RFXAPO00287 272 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 MEFVO15553 781 aaPredicted RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 TADA2AO75478 443 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 ITGB1P05556 798 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 ADRB2P07550 413 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 NFICP08651 508 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 IGFBP4P22692 258 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 CCNE1P24864 410 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 RPL9P32969 192 aaKnown RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 PLCB3Q01970 1234 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 PAK1Q13153 545 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 ADAM9Q13443 819 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 CENPPQ6IPU0 288 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 SASS6Q6UVJ0 657 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 USP37Q86T82 979 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 MLKLQ8NB16 471 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 ZSWIM2Q8NEG5 633 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 CACTINQ8WUQ7 758 aaKnown RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 TMEM174Q8WUU8 243 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 NELFBQ8WX92 580 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 C18orf25Q96B23 403 aaPredicted RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 CDX2Q99626 313 aaPredicted RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 ALG13Q9NP73 1137 aaKnown RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 TUBGCP4Q9UGJ1 667 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 CTNND2Q9UQB3 1225 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 LZTS1Q9Y250 596 aa15.01□□□□□ -0.01
TUBB3-202ENST00000553656 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
TUBB3-202ENST00000553656 COL4A4P53420 1690 aaPredicted RBP15□□□□□ -0.01
TUBB3-202ENST00000553656 CETN3O15182 167 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 GRM6O15303 877 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 B3GAT3O94766 335 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 CSPG5O95196 566 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 TMEM191BP0C7N4 346 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 FOSL2P15408 326 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 CD44P16070 742 aaKnown RBP15□□□□□ -0.01
TUBB3-202ENST00000553656 CYP3A5P20815 502 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 BMP6P22004 513 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 TFAMQ00059 246 aaKnown RBP15□□□□□ -0.01
TUBB3-202ENST00000553656 FKBP3Q00688 224 aaKnown RBP15□□□□□ -0.01
TUBB3-202ENST00000553656 CYP24A1Q07973 514 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 NAB2Q15742 525 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 ZCWPW2Q504Y3 356 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
TUBB3-202ENST00000553656 SPPL3Q8TCT6 385 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 POF1BQ8WVV4 589 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 RABGGTAQ92696 567 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 CCDC127Q96BQ5 260 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 GOLGA2P5Q9HBQ8 144 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 PDE11AQ9HCR9 933 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 DMAC2Q9NW81 257 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 CACNG4Q9UBN1 327 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 NUB1Q9Y5A7 615 aa15□□□□□ -0.01
TUBB3-202ENST00000553656 SF3B1O75533 1304 aaKnown RBP eCLIP14.99□□□□□ -0.013e-6■■■■■ 137.9
TUBB3-202ENST00000553656 PPP1R3GB7ZBB8 358 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 PODXLO00592 558 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 LPXNO60711 386 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 KIF4AO95239 1232 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 TNNC2P02585 160 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 DLATP10515 647 aaKnown RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 EPB41P11171 864 aaKnown RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 KRT13P13646 458 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 TNNI1P19237 187 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 PSMC2P35998 433 aaKnown RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 CLCNKBP51801 687 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 NLRP12P59046 1061 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 SOX4Q06945 474 aaPredicted RBP14.99□□□□□ -0.01
TUBB3-202ENST00000553656 PSMD6Q15008 389 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 ZBTB6Q15916 424 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 UPP1Q16831 310 aa14.99□□□□□ -0.01
TUBB3-202ENST00000553656 KLHL40Q2TBA0 621 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms