RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 AP5M1Q9H0R1 490 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SMARCAD1Q9H4L7 1026 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SPC25Q9HBM1 224 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF302Q9NR11 478 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 C1GALT1Q9NS00 363 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 TUBE1Q9UJT0 475 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 DBR1Q9UK59 544 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 VAV3Q9UKW4 847 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 KAT6AQ92794 2004 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF236Q9UL36 1845 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 A0A087X0B3 334 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ARHGEF35A5YM69 484 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 PP2D1A8MPX8 630 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 BECN2A8MW95 431 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 E9PMD0 336 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 GOLGA6L19H0YKK7 550 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 KPNA6O60684 536 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 FARP2O94887 1054 aaPredicted RBP5.54□□□□□ -1.52
VTI1B-202ENST00000553619 SNAI1O95863 264 aaPredicted RBP5.54□□□□□ -1.52
VTI1B-202ENST00000553619 RPN1P04843 607 aaKnown RBP5.54□□□□□ -1.52
VTI1B-202ENST00000553619 SUPT20HL2P0C7V6 817 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 AKR1A1P14550 325 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 GAP43P17677 238 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 UBA1P22314 1058 aaKnown RBP5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ABCD1P33897 745 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 FLT3LGP49771 235 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 C1QTNF8P60827 252 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ASIC1P78348 528 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 CYP4A11Q02928 519 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 PNOCQ13519 176 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 DHX8Q14562 1220 aaKnown RBP5.54□□□□□ -1.52
VTI1B-202ENST00000553619 DGKDQ16760 1214 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 LY6KQ17RY6 165 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 DUSP28Q4G0W2 176 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 OGFOD2Q6N063 350 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 TAPT1Q6NXT6 567 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 CCDC62Q6P9F0 684 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 UNC13DQ70J99 1090 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 SPATA20Q8TB22 786 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 RAET1EQ8TD07 263 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 AFAP1L1Q8TED9 768 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 FGD4Q96M96 766 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 SPATA33Q96N06 139 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 UIMC1Q96RL1 719 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 LXNQ9BS40 222 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 TRIM9Q9C026 710 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 BHMT2Q9H2M3 363 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ATXN3LQ9H3M9 355 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 BLOC1S4Q9NUP1 217 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 RGL1Q9NZL6 768 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 GABBR1Q9UBS5 961 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 SEL1LQ9UBV2 794 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 SRRDQ9UH36 339 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ZHX1Q9UKY1 873 aaPredicted RBP5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ODF2LQ9ULJ1 636 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 COL4A3BPQ9Y5P4 624 aa5.54□□□□□ -1.52
VTI1B-202ENST00000553619 ASTN1O14525 1302 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 MCM3APO60318 1980 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 LCTP09848 1927 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 WDR81Q562E7 1941 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 IGKV6D-21A0A0A0MT36 114 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 GSTTP1A0A1W2PQM5 241 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 RRN3P2A6NIE6 340 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 H0YCG3 227 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 ADCY3O60266 1144 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 HBP1O60381 514 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 MSCO60682 206 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 TBCAO75347 108 aaKnown RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 RHOBTB3O94955 611 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 FGFR1OPO95684 399 aaKnown RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 IDEP14735 1019 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 SCP2P22307 547 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 YWHABP31946 246 aaKnown RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 TCF7P36402 384 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF165P49910 485 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 MRE11P49959 708 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 CPT1AP50416 773 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 DNM2P50570 870 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 SLC12A3P55017 1021 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 SP2Q02086 613 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 SP4Q02446 784 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 CUL4BQ13620 913 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 MORC3Q14149 939 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 GRM2Q14416 872 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 TPD52L1Q16890 204 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 CCDC144BQ3MJ40 725 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 NAALADL2Q58DX5 795 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 XKR9Q5GH70 373 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 HERC4Q5GLZ8 1057 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF658Q5TYW1 1059 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 RINT1Q6NUQ1 792 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF574Q6ZN55 896 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 GPBP1Q86WP2 473 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 WFDC3Q8IUB2 231 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 FBXO16Q8IX29 292 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-202ENST00000553619 AGBL5Q8NDL9 886 aa5.53□□□□□ -1.52
VTI1B-202ENST00000553619 MCPH1Q8NEM0 835 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms