RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PCDHGA5Q9Y5G8 931 aa15.35■□□□□ 0.05
PRPF39-204ENST00000553605 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
PRPF39-204ENST00000553605 LAMA1P25391 3075 aa15.35■□□□□ 0.05
PRPF39-204ENST00000553605 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
PRPF39-204ENST00000553605 ZMYM2Q9UBW7 1377 aa15.35■□□□□ 0.05
PRPF39-204ENST00000553605 NBEAQ8NFP9 2946 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 WDR27A2RRH5 827 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 RPP40O75818 363 aaKnown RBP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 NPTXRO95502 500 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 TOP3BO95985 862 aaKnown RBP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 ADD1P35611 737 aaKnown RBP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 QARSP47897 775 aaKnown RBP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 DGKKQ5KSL6 1271 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 CREB3L3Q68CJ9 461 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 MFSD6LQ8IWD5 586 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 CSGALNACT1Q8TDX6 532 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 ZCCHC14Q8WYQ9 949 aaKnown RBP15.34■□□□□ 0.05
PRPF39-204ENST00000553605 SMARCD2Q92925 531 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 ZSWIM3Q96MP5 696 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 VPS45Q9NRW7 570 aa15.34■□□□□ 0.05
PRPF39-204ENST00000553605 ARHGEF37A1IGU5 675 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 TAF4O00268 1085 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 ARNTLO00327 626 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 FGFR3P22607 806 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 MPLP40238 635 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 VIPR2P41587 438 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 KPNA1P52294 538 aaPredicted RBP15.33■□□□□ 0.04
PRPF39-204ENST00000553605 AAMPQ13685 434 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 MXD4Q14582 209 aaPredicted RBP15.33■□□□□ 0.04
PRPF39-204ENST00000553605 EMC2Q15006 297 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 AMHR2Q16671 573 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 WDR44Q5JSH3 913 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 SLC27A1Q6PCB7 646 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.04
PRPF39-204ENST00000553605 SCNM1Q9BWG6 230 aa15.33■□□□□ 0.04
PRPF39-204ENST00000553605 C8orf33Q9H7E9 229 aaPredicted RBP15.33■□□□□ 0.04
PRPF39-204ENST00000553605 SETXQ7Z333 2677 aaKnown RBP15.33■□□□□ 0.04
PRPF39-204ENST00000553605 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 C4orf47A7E2U8 309 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 EML1O00423 815 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 THP07101 528 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 CCDC192P0DO97 292 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 ELF1P32519 619 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 CCR2P41597 374 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 MBTD1Q05BQ5 628 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 TFDP1Q14186 410 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 NECTIN1Q15223 517 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 SH3PXD2AQ5TCZ1 1133 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 DAB2IPQ5VWQ8 1189 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 TCEAL6Q6IPX3 200 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 PDZD4Q76G19 769 aaPredicted RBP15.32■□□□□ 0.04
PRPF39-204ENST00000553605 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
PRPF39-204ENST00000553605 ZNF461Q8TAF7 563 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 TBCKQ8TEA7 893 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 TCEAL3Q969E4 200 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 TCEANC2Q96MN5 208 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 MTRQ99707 1265 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
PRPF39-204ENST00000553605 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
PRPF39-204ENST00000553605 BACE2Q9Y5Z0 518 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 DSPP15924 2871 aaKnown RBP15.32■□□□□ 0.04
PRPF39-204ENST00000553605 DMXL2Q8TDJ6 3036 aa15.32■□□□□ 0.04
PRPF39-204ENST00000553605 CYP3A7-CYP3A51PA0A087WV96 503 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 A0A1B0GUA9 196 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 PRRG1O14668 218 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 B4GALT5O43286 388 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 PRPF3O43395 683 aaKnown RBP15.31■□□□□ 0.04
PRPF39-204ENST00000553605 TDP2O95551 362 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 CYP3A7P24462 503 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 SOX9P48436 509 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 PXNP49023 591 aaPredicted RBP15.31■□□□□ 0.04
PRPF39-204ENST00000553605 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
PRPF39-204ENST00000553605 CYP4A22Q5TCH4 519 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 ETNPPLQ8TBG4 499 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
PRPF39-204ENST00000553605 EDEM2Q9BV94 578 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
PRPF39-204ENST00000553605 VWA8A3KMH1 1905 aa15.31■□□□□ 0.04
PRPF39-204ENST00000553605 CCDC163A0A0D9SF12 145 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 CCDC196A0A1B0GTZ2 297 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 HEPACAM2A8MVW5 462 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 PTGESO14684 152 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 P4HBP07237 508 aaKnown RBP15.3■□□□□ 0.04
PRPF39-204ENST00000553605 CEACAM1P13688 526 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 YWHABP31946 246 aaKnown RBP15.3■□□□□ 0.04
PRPF39-204ENST00000553605 AKAP13Q12802 2813 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 NAB2Q15742 525 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 XKR9Q5GH70 373 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 TXNDC11Q6PKC3 985 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 ANKS3Q6ZW76 656 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 YAF2Q8IY57 180 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 SYNPOQ8N3V7 929 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 CCDC148Q8NFR7 591 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms