RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 YME1L1Q96TA2 773 aa20.96■□□□□ 0.95
PSEN1-207ENST00000553599 CGRRF1Q99675 332 aa20.96■□□□□ 0.95
PSEN1-207ENST00000553599 PDE11AQ9HCR9 933 aa20.96■□□□□ 0.95
PSEN1-207ENST00000553599 FANCLQ9NW38 375 aa20.96■□□□□ 0.95
PSEN1-207ENST00000553599 UBQLN1Q9UMX0 589 aaKnown RBP20.96■□□□□ 0.95
PSEN1-207ENST00000553599 TBKBP1A7MCY6 615 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 GTF2H1P32780 548 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 SCNN1GP51170 649 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 ZBTB6Q15916 424 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 JADE1Q6IE81 842 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 TRIM59Q8IWR1 403 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 ANKRD20A12PQ8NF67 263 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 CCDC127Q96BQ5 260 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 KIF12Q96FN5 646 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 TBC1D13Q9NVG8 400 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 INPP5FQ9Y2H2 1132 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 PTPRSQ13332 1948 aa20.95■□□□□ 0.94
PSEN1-207ENST00000553599 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 GOLGA6L19H0YKK7 550 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 DLATP10515 647 aaKnown RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 TNNI1P19237 187 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 RNASELQ05823 741 aaKnown RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 DUOXA2Q1HG44 320 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 FAM117BQ6P1L5 589 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 BEST2Q8NFU1 509 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 ZMAT2Q96NC0 199 aaKnown RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 SAMSN1Q9NSI8 373 aaKnown RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 INTS13Q9NVM9 706 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 ANK1P16157 1881 aa20.94■□□□□ 0.94
PSEN1-207ENST00000553599 FNDC1Q4ZHG4 1894 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-207ENST00000553599 LRRIQ3A6PVS8 624 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-207ENST00000553599 KCNJ18B7U540 433 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 TLL1O43897 1013 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 POMCP01189 267 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 ZNF18P17022 549 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 TUSC3Q13454 348 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 BTG3Q14201 252 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-207ENST00000553599 KCNJ12Q14500 433 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 TCP11X2Q5H9J9 407 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 CHRDL2Q6WN34 429 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 LUZP1Q86V48 1076 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 PLEKHO2Q8TD55 490 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 SP7Q8TDD2 431 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-207ENST00000553599 ANKRD36BP1Q96IX9 119 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 UROC1Q96N76 676 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 FAM193BQ96PV7 902 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-207ENST00000553599 MIOSQ9NXC5 875 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 PCDHA11Q9Y5I1 949 aa20.93■□□□□ 0.94
PSEN1-207ENST00000553599 PDCD11Q14690 1871 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TNNC2P02585 160 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TPM2P07951 284 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 NFICP08651 508 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TMEM191BP0C7N4 346 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 CDK11BP21127 795 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 RPL9P32969 192 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 MTIF2P46199 727 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 GATMP50440 423 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 AFF1P51825 1210 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 WNT7BP56706 349 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TFAMQ00059 246 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 DSC1Q08554 894 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 NAB2Q15742 525 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 GLRA4Q5JXX5 417 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TMCO2Q7Z6W1 182 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 EFCAB13Q8IY85 973 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 SLC35C1Q96A29 364 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 DDX27Q96GQ7 796 aaKnown RBP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TMEM175Q9BSA9 504 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 HSD3B7Q9H2F3 369 aa20.92■□□□□ 0.94
PSEN1-207ENST00000553599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.92■□□□□ 0.94
PSEN1-207ENST00000553599 TDRD15B5MCY1 1934 aaKnown RBP20.91■□□□□ 0.94
PSEN1-207ENST00000553599 PMM2O15305 246 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 N4BP1O75113 896 aaKnown RBP20.91■□□□□ 0.94
PSEN1-207ENST00000553599 TRIP11Q15643 1979 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 RAB30Q15771 203 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 MAN2A1Q16706 1144 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 PRPF38BQ5VTL8 546 aaKnown RBP20.91■□□□□ 0.94
PSEN1-207ENST00000553599 TCERG1LQ5VWI1 586 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 FIBCD1Q8N539 461 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 CXCL16Q9H2A7 254 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 ITGA11Q9UKX5 1188 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 PLAGL2Q9UPG8 496 aa20.91■□□□□ 0.94
PSEN1-207ENST00000553599 LRRC10BA6NIK2 292 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 PAX3P23760 479 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 LRPAP1P30533 357 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 DLG4P78352 724 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 PAN2Q504Q3 1202 aaKnown RBP20.9■□□□□ 0.94
PSEN1-207ENST00000553599 DCAF17Q5H9S7 520 aaPredicted RBP20.9■□□□□ 0.94
PSEN1-207ENST00000553599 C1orf220Q5T0J3 134 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 CREBRFQ8IUR6 639 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 COLGALT2Q8IYK4 626 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 POP1Q99575 1024 aaKnown RBP20.9■□□□□ 0.94
PSEN1-207ENST00000553599 TUBGCP2Q9BSJ2 902 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 TMEM8AQ9HCN3 771 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 AAASQ9NRG9 546 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 DPP3Q9NY33 737 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
PSEN1-207ENST00000553599 RWDD3Q9Y3V2 267 aa20.9■□□□□ 0.94
PSEN1-207ENST00000553599 PTPRJQ12913 1337 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms