RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 H2AFVQ71UI9 128 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 ARMCX2Q7L311 632 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 ZNF571Q7Z3V5 609 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 ZNF677Q86XU0 584 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 PPTC7Q8NI37 304 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 SLC30A5Q8TAD4 765 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 BRI3BPQ8WY22 251 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 FAXDC2Q96IV6 333 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 NT5C1BQ96P26 610 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 FNBP1Q96RU3 617 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 SYT11Q9BT88 431 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TMEM117Q9H0C3 514 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 PCIF1Q9H4Z3 704 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 RAB20Q9NX57 234 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 AGO2Q9UKV8 859 aaKnown RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 RLFQ13129 1914 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 ADGRA3Q8IWK6 1321 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 SCN4AP35499 1836 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 A0A0B4J269 797 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 A0A0U1RQJ8 604 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 TARSL2A2RTX5 802 aaKnown RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 GRID2IPA4D2P6 1211 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 CCDC151A5D8V7 595 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 MANSC4A6NHS7 340 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 SLC15A5A6NIM6 579 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 LRRIQ4A6NIV6 560 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 LRRIQ3A6PVS8 624 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 SOBPA7XYQ1 873 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 SPINT1O43278 529 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ERLIN1O75477 346 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ARIH2O95376 493 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PGK2P07205 417 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 TMEM253P0C7T8 217 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 CYP2C8P10632 490 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 GZMAP12544 262 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 BMP2P12643 396 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 HOXD8P13378 290 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 TMOD1P28289 359 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ADORA2AP29274 412 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ABL2P42684 1182 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 GCLMP48507 274 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 HADHBP55084 474 aaKnown RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 FSTL1Q12841 308 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PLCB4Q15147 1175 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PCBP1Q15365 356 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ELF2Q15723 593 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 MAPK6Q16659 721 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 LY6KQ17RY6 165 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ERCC6LQ2NKX8 1250 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 HSDL1Q3SXM5 330 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 WDR44Q5JSH3 913 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 WDR78Q5VTH9 848 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 MAP1SQ66K74 1059 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 IQSEC1Q6DN90 963 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 SLC39A4Q6P5W5 647 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 C15orf39Q6ZRI6 1047 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 TAS1R3Q7RTX0 852 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PLEKHH3Q7Z736 793 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 CBWD2Q8IUF1 395 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 RHOT2Q8IXI1 618 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 FAM71AQ8IYT1 594 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PHTF2Q8N3S3 785 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 MSANTD4Q8NCY6 345 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ZNF526Q8TF50 670 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 HNRNPLLQ8WVV9 542 aaKnown RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 PRPF31Q8WWY3 499 aaKnown RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ATRIPQ8WXE1 791 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 CTNNBL1Q8WYA6 563 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 SHC3Q92529 594 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 POM121Q96HA1 1249 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ABHD16BQ9H3Z7 469 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 UBE2TQ9NPD8 197 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-221ENST00000553498 TRIM10Q9UDY6 481 aa7.88□□□□□ -1.15
ATXN3-221ENST00000553498 ADGRA2Q96PE1 1338 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ANKRD62A6NC57 917 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ACKR2O00590 384 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 CLDN3O15551 220 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 CELF2O95319 508 aaKnown RBP7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ABL1P00519 1130 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ATP1A1P05023 1023 aaKnown RBP7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ADRB2P07550 413 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 TNFAIP3P21580 790 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 TBXAS1P24557 533 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-221ENST00000553498 PAFAH1B1P43034 410 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 NAP1L1P55209 391 aaKnown RBP7.87□□□□□ -1.15
ATXN3-221ENST00000553498 DLG4P78352 724 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ARID5AQ03989 594 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 MCL1Q07820 350 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ARHGAP1Q07960 439 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 VAC14Q08AM6 782 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 LAMTOR4Q0VGL1 99 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 CAPSQ13938 189 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 FAM187BQ17R55 369 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 ZACNQ401N2 412 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 CFAP221Q4G0U5 840 aa7.87□□□□□ -1.15
ATXN3-221ENST00000553498 GLE1Q53GS7 698 aaKnown RBP7.87□□□□□ -1.15
ATXN3-221ENST00000553498 TAPT1Q6NXT6 567 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms