RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LPPQ93052 612 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ACSF2Q96CM8 615 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-219ENST00000553488 FAM167AQ96KS9 214 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 CEP89Q96ST8 783 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ZNF577Q9BSK1 485 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 GSX2Q9BZM3 304 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 NRDE2Q9H7Z3 1164 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 DLGAP2Q9P1A6 1054 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 GABBR1Q9UBS5 961 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 DNAJB4Q9UDY4 337 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 PCDHA10Q9Y5I2 948 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 SMCO2A6NFE2 343 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 SLC27A2O14975 620 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 EDIL3O43854 480 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 CSDE1O75534 798 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 PAPLNO95428 1278 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 LMNAP02545 664 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 PSAPP07602 524 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 CNPP09543 421 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 TMOD1P28289 359 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 ZNF76P36508 570 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 PRKCEQ02156 737 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 TARBP2Q15633 366 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 LETM2Q2VYF4 491 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 JAKMIP3Q5VZ66 844 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 CAPN12Q6ZSI9 719 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 TRMT1LQ7Z2T5 733 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 CMASQ8NFW8 434 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 EXOC6Q8TAG9 804 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 KLHL5Q96PQ7 755 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 RHOBTB2Q9BYZ6 727 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 GLT8D2Q9H1C3 349 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 SEMA4AQ9H3S1 761 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 TBC1D22BQ9NU19 505 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 RBM28Q9NW13 759 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 DACT1Q9NYF0 836 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 DLL3Q9NYJ7 618 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 IGSF9Q9P2J2 1179 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 WNT16Q9UBV4 365 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 MKL2Q9ULH7 1088 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 R4GN57 208 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 FRYQ5TBA9 3013 aa8.2□□□□□ -1.1
ATXN3-219ENST00000553488 CNOT1A5YKK6 2376 aaKnown RBP8.2□□□□□ -1.1
ATXN3-219ENST00000553488 F5P12259 2224 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 VWA8A3KMH1 1905 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 IGKV6-21A0A0C4DH24 114 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 ESYT2A0FGR8 921 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 CARNS1A5YM72 827 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 WDR64B1ANS9 1081 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 OFD1O75665 1012 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 EFEMP2O95967 443 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 CIITAP33076 1130 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 IDH3AP50213 366 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 BMS1Q14692 1282 aaKnown RBP8.19□□□□□ -1.1
ATXN3-219ENST00000553488 NECTIN1Q15223 517 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 NOMO2Q5JPE7 1267 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 CREB3L3Q68CJ9 461 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 DGLUCYQ7Z3D6 616 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 ZNF280BQ86YH2 543 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 KIAA2013Q8IYS2 634 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 RNF168Q8IYW5 571 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-219ENST00000553488 RSAD2Q8WXG1 361 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 SAP130Q9H0E3 1048 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 TBC1D17Q9HA65 648 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 CHST12Q9NRB3 414 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 FAM105AQ9NUU6 356 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 EPS15L1Q9UBC2 864 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 FBXL21Q9UKT6 434 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 BRPF3Q9ULD4 1205 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 LAMA1P25391 3075 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 CLUHO75153 1309 aa8.19□□□□□ -1.1
ATXN3-219ENST00000553488 A0A087WZ62 844 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 MSH4O15457 936 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 ZNF623O75123 536 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 DDHD2O94830 711 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 MICAL2O94851 1124 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 STBD1O95210 358 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 ITGB2P05107 769 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 SRFP11831 508 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 GLULP15104 373 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 COL8A1P27658 744 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 CDC27P30260 824 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 AFF1P51825 1210 aaKnown RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 TBC1D8BQ0IIM8 1120 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 PFKFB3Q16875 520 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 LONRF3Q496Y0 759 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 PRR16Q569H4 304 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 GLB1LQ6UWU2 654 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 RAB44Q7Z6P3 723 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 RIN2Q8WYP3 895 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 ZNF707Q96C28 371 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 TCEANC2Q96MN5 208 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 SCLT1Q96NL6 688 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 MYADMQ96S97 322 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 FDXACB1Q9BRP7 624 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 HERC2P3Q9BVR0 1158 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms