RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 USP41Q3LFD5 358 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 HERC4Q5GLZ8 1057 aaPredicted RBP20.5■□□□□ 0.87
HDAC4-217ENST00000553145 RTP2Q5QGT7 225 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 IQUBQ8NA54 791 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 FEZF2Q8TBJ5 459 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
HDAC4-217ENST00000553145 SUSD6Q92537 303 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 CUEDC2Q9H467 287 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 RXFP1Q9HBX9 757 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 OLFML3Q9NRN5 406 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 PANK4Q9NVE7 773 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 TTC26A0AVF1 554 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 OGTO15294 1046 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 POLR2DO15514 142 aaKnown RBP20.49■□□□□ 0.87
HDAC4-217ENST00000553145 CLTAP09496 248 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 ABCD1P33897 745 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 KIAA1841Q6NSI8 718 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 KANK3Q6NY19 840 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 PRSS55Q6UWB4 352 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-217ENST00000553145 ADHFE1Q8IWW8 467 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 RIN2Q8WYP3 895 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-217ENST00000553145 KHSRPQ92945 711 aaKnown RBP eCLIP20.49■□□□□ 0.871e-7■■■■■ 27
HDAC4-217ENST00000553145 HVCN1Q96D96 273 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 UROC1Q96N76 676 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 MSTO1Q9BUK6 570 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 TRIM9Q9C026 710 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 SLC38A7Q9NVC3 462 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 FAM13BQ9NYF5 915 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 PRKAG3Q9UGI9 489 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 SSX2IPQ9Y2D8 614 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 PLXNA3P51805 1871 aa20.49■□□□□ 0.87
HDAC4-217ENST00000553145 B3GAT3O94766 335 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 GCNT3O95395 438 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 HOXB8P17481 243 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-217ENST00000553145 RPL17P18621 184 aaKnown RBP20.48■□□□□ 0.87
HDAC4-217ENST00000553145 CASP1P29466 404 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 KRT85P78386 507 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 SPAG1Q07617 926 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 ENOX2Q16206 610 aaKnown RBP20.48■□□□□ 0.87
HDAC4-217ENST00000553145 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
HDAC4-217ENST00000553145 FAM171A1Q5VUB5 890 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 DCLRE1AQ6PJP8 1040 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 PPFIBP1Q86W92 1011 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 GJD3Q8N144 294 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 C12orf76Q8N812 135 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-217ENST00000553145 HPS3Q969F9 1004 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 SPATA32Q96LK8 384 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 TUBGCP4Q9UGJ1 667 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 STYXL1Q9Y6J8 313 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 VWA8A3KMH1 1905 aa20.48■□□□□ 0.87
HDAC4-217ENST00000553145 C19orf67A6NJJ6 358 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 PODXLO00592 558 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 ADH1AP07327 375 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 BRCC3P46736 316 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 CEP57Q86XR8 500 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 CCDC65Q8IXS2 484 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 GLIS3Q8NEA6 775 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 FBXL18Q96ME1 805 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 PLEKHA5Q9HAU0 1116 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 DZANK1Q9NVP4 752 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 CPSF3Q9UKF6 684 aaKnown RBP20.47■□□□□ 0.87
HDAC4-217ENST00000553145 KCNH3Q9ULD8 1083 aa20.47■□□□□ 0.87
HDAC4-217ENST00000553145 LACTBL1A8MY62 500 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 I3L4J1 428 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 WEE2P0C1S8 567 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 ADSSP30520 456 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 SSTR3P32745 418 aaPredicted RBP20.46■□□□□ 0.87
HDAC4-217ENST00000553145 ACOT2P49753 483 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 KYAT1Q16773 422 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 RARS2Q5T160 578 aaKnown RBP20.46■□□□□ 0.87
HDAC4-217ENST00000553145 CNNM4Q6P4Q7 775 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 GLYCTKQ8IVS8 523 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 GPR65Q8IYL9 337 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 PIK3R5Q8WYR1 880 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 C7orf25Q9BPX7 421 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 TTPALQ9BTX7 342 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 LRRC27Q9C0I9 530 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 FNIP2Q9P278 1114 aa20.46■□□□□ 0.87
HDAC4-217ENST00000553145 ADRB2P07550 413 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 PFKFB1P16118 471 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 FGFR3P22607 806 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 ASIC1P78348 528 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 AMPD3Q01432 767 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 PPP2R3AQ06190 1150 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 ELAVL2Q12926 359 aaKnown RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 CBX2Q14781 532 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 ZBTB6Q15916 424 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 ADALQ6DHV7 355 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 GRAMD1CQ8IYS0 662 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 LNX1Q8TBB1 728 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 KIF12Q96FN5 646 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 DDX27Q96GQ7 796 aaKnown RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 BLZF1Q9H2G9 400 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 ADAM7Q9H2U9 754 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 RPF1Q9H9Y2 349 aaKnown RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 MAGEF1Q9HAY2 307 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms