RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 OSBPL6Q9BZF3 934 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 FOXQ1Q9C009 403 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 R4GN57 208 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 OTOGLQ3ZCN5 2332 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 KANSL1LA0AUZ9 987 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 ARHGEF35A5YM69 484 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 H3BQV1 296 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 CCL16O15467 120 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
CKAP4-202ENST00000552828 PRKCQQ04759 706 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 UPP1Q16831 310 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 ZNF528Q3MIS6 628 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 SLC44A4Q53GD3 710 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 LARP1BQ659C4 914 aaKnown RBP13.03□□□□□ -0.32
CKAP4-202ENST00000552828 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
CKAP4-202ENST00000552828 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
CKAP4-202ENST00000552828 DEPTORQ8TB45 409 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 KCNG4Q8TDN1 519 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 UROC1Q96N76 676 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 AVENQ9NQS1 362 aaPredicted RBP13.03□□□□□ -0.32
CKAP4-202ENST00000552828 DNMT3BQ9UBC3 853 aaKnown RBP13.03□□□□□ -0.32
CKAP4-202ENST00000552828 GDAQ9Y2T3 454 aa13.03□□□□□ -0.32
CKAP4-202ENST00000552828 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 B3GAT3O94766 335 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 PDCP20941 246 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 CLCNKBP51801 687 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 PFKPQ01813 784 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
CKAP4-202ENST00000552828 MLF2Q15773 248 aaPredicted RBP13.02□□□□□ -0.33
CKAP4-202ENST00000552828 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
CKAP4-202ENST00000552828 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 ALKAL1Q6UXT8 129 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 NPAS3Q8IXF0 933 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 SUMF1Q8NBK3 374 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 KIFAP3Q92845 792 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 HCFC1R1Q9NWW0 138 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 GDE1Q9NZC3 331 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 FBXO4Q9UKT5 387 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 CDY1Q9Y6F8 540 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 GPR179Q6PRD1 2367 aa13.02□□□□□ -0.33
CKAP4-202ENST00000552828 SMIM28A0A1B0GU29 152 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 LRRN2O75325 713 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ECI2O75521 394 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ABLIM3O94929 683 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 U2AF2P26368 475 aaKnown RBP eCLIP13.01□□□□□ -0.33
CKAP4-202ENST00000552828 MAGEA9P43362 315 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ECM1Q16610 540 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 SLC8B1Q6J4K2 584 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 APBB1IPQ7Z5R6 666 aaPredicted RBP13.01□□□□□ -0.33
CKAP4-202ENST00000552828 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 RUBCNQ92622 972 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 CLDN23Q96B33 292 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
CKAP4-202ENST00000552828 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 BCO2Q9BYV7 579 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 NOL7Q9UMY1 257 aaKnown RBP13.01□□□□□ -0.33
CKAP4-202ENST00000552828 POLIQ9UNA4 740 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
CKAP4-202ENST00000552828 MTF2Q9Y483 593 aaPredicted RBP13.01□□□□□ -0.33
CKAP4-202ENST00000552828 CEP250Q9BV73 2442 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 FAM170BA6NMN3 283 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 K7ERI5 159 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 TBC1D4O60343 1298 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
CKAP4-202ENST00000552828 LIG1P18858 919 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
CKAP4-202ENST00000552828 GRM5P41594 1212 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 TRAPPC10P48553 1259 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 PDIA5Q14554 519 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 ZNF174Q15697 407 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 GLRA4Q5JXX5 417 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 POTEHQ6S545 545 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 NELL1Q92832 810 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 NELL2Q99435 816 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 KXD1Q9BQD3 176 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 BHMT2Q9H2M3 363 aa13□□□□□ -0.33
CKAP4-202ENST00000552828 MICAL2O94851 1124 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 RHOP08100 348 aa12.99□□□□□ -0.33
CKAP4-202ENST00000552828 SOX4Q06945 474 aaPredicted RBP12.99□□□□□ -0.33
CKAP4-202ENST00000552828 MRPL58Q14197 206 aaKnown RBP12.99□□□□□ -0.33
CKAP4-202ENST00000552828 SLC5A9Q2M3M2 681 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms