RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 RASSF2P50749 326 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PTENP60484 403 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 RPS6P62753 249 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 MAPK7Q13164 816 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 CNGA2Q16280 664 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ZC3H12AQ5D1E8 599 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SH3D19Q5HYK7 790 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SPDYAQ5MJ70 313 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 WASHC2DQ5SRD0 308 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 DUPD1Q68J44 220 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 IRGCQ6NXR0 463 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 MIER3Q7Z3K6 550 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PEX26Q7Z412 305 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SPATA21Q7Z572 469 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ARHGAP22Q7Z5H3 698 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 DAW1Q8N136 415 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ARHGAP18Q8N392 663 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 INPP5DQ92835 1189 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SLC35C1Q96A29 364 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ERP44Q9BS26 406 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 CCDC28BQ9BUN5 200 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 STRA6Q9BX79 667 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 TRIM4Q9C037 500 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 DDX47Q9H0S4 455 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 CHCHD3Q9NX63 227 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 KLHL14Q9P2G3 628 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PTPRFP10586 1907 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 RLFQ13129 1914 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 LOXHD1Q8IVV2 1947 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 VWA5AO00534 786 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 UNC5CO95185 931 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 ACTN1P12814 892 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 PON1P27169 355 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 FLT3P36888 993 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 DNA2P51530 1060 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 RNASE9P60153 205 aaKnown RBP11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 POU5F1Q01860 360 aaKnown RBP11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 MTMR1Q13613 665 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 PGM5Q15124 567 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 ODR4Q5SWX8 454 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 METTL13Q8N6R0 699 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 STK32AQ8WU08 396 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 EZH1Q92800 747 aaPredicted RBP11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 GORASP1Q9BQQ3 440 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 CYP39A1Q9NYL5 469 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 AMACRQ9UHK6 382 aa11.78□□□□□ -0.52
TUBA1C-209ENST00000552448 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 A0A087X0T9 212 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 PODXLO00592 558 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 TTI1O43156 1089 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 FAM228BP0C875 321 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 ZBTB48P10074 688 aaPredicted RBP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 UCHL3P15374 230 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 DR1Q01658 176 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 RAPGEF1Q13905 1077 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 PLS1Q14651 629 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 COG2Q14746 738 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 GNPTABQ3T906 1256 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 DCAF17Q5H9S7 520 aaPredicted RBP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 ANO7Q6IWH7 933 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 PADI6Q6TGC4 694 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 STXBP4Q6ZWJ1 553 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 KSR1Q8IVT5 923 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 TPCN2Q8NHX9 752 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 FAM81AQ8TBF8 368 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 ATG4CQ96DT6 458 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 WNK4Q96J92 1243 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 AP1M1Q9BXS5 423 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 LRMDAQ9H2I8 198 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 AZI2Q9H6S1 392 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 TBC1D22BQ9NU19 505 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 DMAC2Q9NW81 257 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 PRKAG3Q9UGI9 489 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 DBR1Q9UK59 544 aaKnown RBP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 PACSIN2Q9UNF0 486 aaPredicted RBP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 STXBP5LQ9Y2K9 1186 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 DAAM1Q9Y4D1 1078 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.52
TUBA1C-209ENST00000552448 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 LYPLA2O95372 231 aa11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 PSMC2P35998 433 aaKnown RBP11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 HMGCS2P54868 508 aa11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 VGLL4Q14135 290 aa11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 SETDB1Q15047 1291 aa11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 LRRC23Q53EV4 343 aaPredicted RBP11.76□□□□□ -0.53
TUBA1C-209ENST00000552448 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms