RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 NUP58Q9BVL2 599 aa8.78□□□□□ -1
CHPT1-208ENST00000552215 KCTD10Q9H3F6 313 aa8.78□□□□□ -1
CHPT1-208ENST00000552215 GPR182O15218 404 aa8.77□□□□□ -1
CHPT1-208ENST00000552215 EIF3DO15371 548 aaKnown RBP eCLIP8.77□□□□□ -1
CHPT1-208ENST00000552215 CST3P01034 146 aaPredicted RBP8.77□□□□□ -1
CHPT1-208ENST00000552215 CCDC172P0C7W6 258 aa8.77□□□□□ -1
CHPT1-208ENST00000552215 SMC1AQ14683 1233 aaKnown RBP8.77□□□□□ -1
CHPT1-208ENST00000552215 LRRC55Q6ZSA7 311 aa8.77□□□□□ -1
CHPT1-208ENST00000552215 WNT8BQ93098 351 aa8.77□□□□□ -1
CHPT1-208ENST00000552215 ACO2Q99798 780 aaKnown RBP8.77□□□□□ -1
CHPT1-208ENST00000552215 OSBPL7Q9BZF2 842 aa8.77□□□□□ -1
CHPT1-208ENST00000552215 TRPV2Q9Y5S1 764 aa8.77□□□□□ -1
CHPT1-208ENST00000552215 A0A1B0GTH6 734 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 SPATA31D3P0C874 917 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 ZNF18P17022 549 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 SP100P23497 879 aaPredicted RBP8.77□□□□□ -1.01
CHPT1-208ENST00000552215 PON1P27169 355 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 EDRF1Q3B7T1 1238 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 HYIQ5T013 277 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 OR6B2Q6IFH4 312 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 MAMDC4Q6UXC1 1216 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 SPATA31D4Q6ZUB0 917 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 FRMD5Q7Z6J6 570 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 MAP4K3Q8IVH8 894 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 ABHD10Q9NUJ1 306 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 HESX1Q9UBX0 185 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 PTPN22Q9Y2R2 807 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 PPP2R2CQ9Y2T4 447 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 DUSP10Q9Y6W6 482 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 MOCS3O95396 460 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 GJB6O95452 261 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 CLTAP09496 248 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 CPB1P15086 417 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 CTNNA2P26232 953 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 ARL2P36404 184 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 AFF1P51825 1210 aaKnown RBP8.77□□□□□ -1.01
CHPT1-208ENST00000552215 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
CHPT1-208ENST00000552215 TRIM65Q6PJ69 517 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 PARD3BQ8TEW8 1205 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 SLC20A1Q8WUM9 679 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 BHMTQ93088 406 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 APOL5Q9BWW9 433 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 TUBGCP4Q9UGJ1 667 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 LIMA1Q9UHB6 759 aaKnown RBP8.77□□□□□ -1.01
CHPT1-208ENST00000552215 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
CHPT1-208ENST00000552215 MYH7BA7E2Y1 1941 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 SBF1O95248 1867 aa8.77□□□□□ -1.01
CHPT1-208ENST00000552215 KAT6AQ92794 2004 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 RGPD3A6NKT7 1758 aaPredicted RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 RGPD4Q7Z3J3 1758 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 EVI5O60447 810 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 P4HA1P13674 534 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 DARSP14868 501 aaKnown RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 BRCC3P46736 316 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KIF11P52732 1056 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 GTF2BQ00403 316 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 EHHADHQ08426 723 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 NECAB2Q7Z6G3 386 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 TMTC1Q8IUR5 882 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 ZNF653Q96CK0 615 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 FAM161BQ96MY7 647 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 HCRTO43612 131 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KRT86O43790 486 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 MSCO60682 206 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 F2P00734 622 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 LCP1P13796 627 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 NSFP46459 744 aaKnown RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 ZBED6P86452 979 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 BFSP2Q13515 415 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KAZNQ674X7 775 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 ALKBH5Q6P6C2 394 aaKnown RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SLC27A1Q6PCB7 646 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 STKLD1Q8NE28 680 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KIF18AQ8NI77 898 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 GPR152Q8TDT2 470 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SLITRK6Q9H5Y7 841 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 NUDT5Q9UKK9 219 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 A0A0U1RQG5 324 aaPredicted RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 M0QYV0 167 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 CAPN9O14815 690 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SGPL1O95470 568 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 EDN1P05305 212 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 GNA15P30679 374 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 CYP4A22Q5TCH4 519 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 DAAM2Q86T65 1068 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SLC47A2Q86VL8 602 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 TRIM31Q9BZY9 425 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KLHL11Q9NVR0 708 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 GTF2IRD1Q9UHL9 959 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 TTLL3Q9Y4R7 772 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 ARHGAP6O43182 974 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 N4BP1O75113 896 aaKnown RBP8.76□□□□□ -1.01
CHPT1-208ENST00000552215 CSF2RAP15509 400 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 KRT83P78385 493 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 HIC1Q14526 733 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 SDHAF4Q5VUM1 108 aa8.76□□□□□ -1.01
CHPT1-208ENST00000552215 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms