RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MESDQ14696 234 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 MAPK6Q16659 721 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 ZNF792Q3KQV3 632 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 ARMCX2Q7L311 632 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 IFT81Q8WYA0 676 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 TCHPQ9BT92 498 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 NUP85Q9BW27 656 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 APOBEC3GQ9HC16 384 aaKnown RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 UVRAGQ9P2Y5 699 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 CHORDC1Q9UHD1 332 aaPredicted RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 TRPC6Q9Y210 931 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 ESYT3A0FGR9 886 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 TMEM110-MUSTN1A8MSY1 372 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 BHMG1C9JSJ3 638 aaPredicted RBP15.03■□□□□ -0
RAB3IP-216ENST00000552199 SYF2O95926 243 aaKnown RBP15.03■□□□□ -0
RAB3IP-216ENST00000552199 CALCAP01258 141 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 FGGP02679 453 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 TNFSF9P41273 254 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 AP3M2P53677 418 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 MCL1Q07820 350 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 ZBTB33Q86T24 672 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 UBL4BQ8N7F7 174 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 ZNF564Q8TBZ8 553 aaPredicted RBP15.03■□□□□ -0
RAB3IP-216ENST00000552199 TRAPPC12Q8WVT3 735 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 ALG3Q92685 438 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 RNPC3Q96LT9 517 aaKnown RBP15.03■□□□□ -0
RAB3IP-216ENST00000552199 NAP1L3Q99457 506 aaPredicted RBP15.03■□□□□ -0
RAB3IP-216ENST00000552199 DDX47Q9H0S4 455 aaKnown RBP15.03■□□□□ -0
RAB3IP-216ENST00000552199 SLITRK6Q9H5Y7 841 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 NFU1Q9UMS0 254 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 SLC45A1Q9Y2W3 748 aa15.03■□□□□ -0
RAB3IP-216ENST00000552199 PDHXO00330 501 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 ABLIM1O14639 778 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 OGTO15294 1046 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 PHACTR2O75167 634 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 CLTAP09496 248 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 CETPP11597 493 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 UNGP13051 313 aaPredicted RBP15.02■□□□□ -0
RAB3IP-216ENST00000552199 COMTP21964 271 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 CLUL1Q15846 466 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 TAPT1Q6NXT6 567 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 RHPN2Q8IUC4 686 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 EIF1ADQ8N9N8 165 aaKnown RBP15.02■□□□□ -0
RAB3IP-216ENST00000552199 ZSWIM1Q9BR11 485 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 WNT8AQ9H1J5 351 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 VPS18Q9P253 973 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 PLXNB2O15031 1838 aa15.02■□□□□ -0
RAB3IP-216ENST00000552199 AGPSO00116 658 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 TBXAS1P24557 533 aaPredicted RBP15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 GYS2P54840 703 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 ARHGAP1Q07960 439 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 LAMC2Q13753 1193 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 NCOA4Q13772 614 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 TFDP1Q14186 410 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 EFCAB12Q6NXP0 572 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 WDR49Q8IV35 697 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 CCDC26Q8TAB7 109 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 CD101Q93033 1021 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 MS4A4AQ96JQ5 239 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 FZD8Q9H461 694 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 ZNF408Q9H9D4 720 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 ERAP1Q9NZ08 941 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 CNOT8Q9UFF9 292 aaKnown RBP15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 ADAM21Q9UKJ8 722 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 CNTN6Q9UQ52 1028 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 NUB1Q9Y5A7 615 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 PCDHB4Q9Y5E5 795 aa15.02□□□□□ -0.01
RAB3IP-216ENST00000552199 BTBD19C9JJ37 291 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 ACKR2O00590 384 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 ASAP2O43150 1006 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 CLSTN1O94985 981 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 FAM153BP0C7A2 387 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 ADORA2AP29274 412 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 GGCXP38435 758 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 PEX5P50542 639 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 NOP14P78316 857 aaKnown RBP15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 ZNF211Q13398 564 aaPredicted RBP15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 SURF1Q15526 300 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 TRADDQ15628 312 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 FAM153CQ494X1 144 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 TSHZ1Q6ZSZ6 1077 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 ZNF771Q7L3S4 317 aaPredicted RBP15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 MAATS1Q7Z4T9 603 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 MCOLN2Q8IZK6 566 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 TSEN2Q8NCE0 465 aaKnown RBP15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 KRT35Q92764 455 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 RNPEPQ9H4A4 650 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 VTA1Q9NP79 307 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 FAM153AQ9UHL3 310 aa15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 CPSF3Q9UKF6 684 aaKnown RBP15.01□□□□□ -0.01
RAB3IP-216ENST00000552199 EVPLQ92817 2033 aa15□□□□□ -0.01
RAB3IP-216ENST00000552199 UMODL1Q5DID0 1318 aa15□□□□□ -0.01
RAB3IP-216ENST00000552199 RBM47A0AV96 593 aaKnown RBP15□□□□□ -0.01
RAB3IP-216ENST00000552199 GOLGA6BA6NDN3 693 aa15□□□□□ -0.01
RAB3IP-216ENST00000552199 CYP1A1P04798 512 aaPredicted RBP15□□□□□ -0.01
RAB3IP-216ENST00000552199 PROZP22891 400 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms