RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ZNF233A6NK53 670 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 GRM6O15303 877 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 PPP1R2P41236 205 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 UBE3AQ05086 875 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 SPAG1Q07617 926 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 TMEM173Q86WV6 379 aaPredicted RBP20.27■□□□□ 0.84
DDX54-209ENST00000551912 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 SLC9A9Q8IVB4 645 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 ADSSL1Q8N142 457 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 SPPL3Q8TCT6 385 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 TMEM174Q8WUU8 243 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 MYLIPQ8WY64 445 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 IGSF21Q96ID5 467 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 COLEC11Q9BWP8 271 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 PUF60Q9UHX1 559 aaKnown RBP20.27■□□□□ 0.84
DDX54-209ENST00000551912 DERAQ9Y315 318 aa20.27■□□□□ 0.84
DDX54-209ENST00000551912 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.27■□□□□ 0.84
DDX54-209ENST00000551912 COL4A4P53420 1690 aaPredicted RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 TULP1O00294 542 aaPredicted RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 XPOTO43592 962 aaKnown RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 EXOC3O60645 756 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 NR3C1P04150 777 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 BMP6P22004 513 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 SOX4Q06945 474 aaPredicted RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 MYBPC2Q14324 1141 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 TMEM132DQ14C87 1099 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 SNRNP35Q16560 246 aaKnown RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 NFIL3Q16649 462 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 PTPROQ16827 1216 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 JADE1Q6IE81 842 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 RDH13Q8NBN7 331 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 C18orf25Q96B23 403 aaPredicted RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 UROC1Q96N76 676 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 LMAN2LQ9H0V9 348 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 DMAC2Q9NW81 257 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 CACNG4Q9UBN1 327 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 UBQLN1Q9UMX0 589 aaKnown RBP20.26■□□□□ 0.83
DDX54-209ENST00000551912 LZTS1Q9Y250 596 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 C2CD2Q9Y426 696 aa20.26■□□□□ 0.83
DDX54-209ENST00000551912 PSMA7O14818 248 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 NFICP08651 508 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 IGFBP4P22692 258 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 ADGRE1Q14246 886 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 ZBTB6Q15916 424 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 CENPPQ6IPU0 288 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 BCL7CQ8WUZ0 217 aaPredicted RBP20.25■□□□□ 0.83
DDX54-209ENST00000551912 POF1BQ8WVV4 589 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 RABGGTAQ92696 567 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 DDX27Q96GQ7 796 aaKnown RBP20.25■□□□□ 0.83
DDX54-209ENST00000551912 DHTKD1Q96HY7 919 aaPredicted RBP20.25■□□□□ 0.83
DDX54-209ENST00000551912 TSG101Q99816 390 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 PAAF1Q9BRP4 392 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 GOLGA2P5Q9HBQ8 144 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 MARCH5Q9NX47 278 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 LMCD1Q9NZU5 365 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 TUBGCP4Q9UGJ1 667 aa20.25■□□□□ 0.83
DDX54-209ENST00000551912 PDCD11Q14690 1871 aaKnown RBP20.24■□□□□ 0.83
DDX54-209ENST00000551912 FOSL2P15408 326 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 POU3F3P20264 500 aaPredicted RBP20.24■□□□□ 0.83
DDX54-209ENST00000551912 CYP3A5P20815 502 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 PTMSP20962 102 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 NR2F2P24468 414 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 RPL13P26373 211 aaKnown RBP20.24■□□□□ 0.83
DDX54-209ENST00000551912 RPL9P32969 192 aaKnown RBP20.24■□□□□ 0.83
DDX54-209ENST00000551912 CLCNKBP51801 687 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 SURF1Q15526 300 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 UPP1Q16831 310 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 EDRF1Q3B7T1 1238 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 ZCWPW2Q504Y3 356 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 NT5DC4Q86YG4 428 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 BEST2Q8NFU1 509 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 MRPL38Q96DV4 380 aaKnown RBP20.24■□□□□ 0.83
DDX54-209ENST00000551912 PDE11AQ9HCR9 933 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 STK39Q9UEW8 545 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 PLXNA4Q9HCM2 1894 aa20.24■□□□□ 0.83
DDX54-209ENST00000551912 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 F8W810 466 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 TADA2AO75478 443 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 CD44P16070 742 aaKnown RBP20.23■□□□□ 0.83
DDX54-209ENST00000551912 ANK1P16157 1881 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 DNAJB1P25685 340 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 WNT7BP56706 349 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 CYP24A1Q07973 514 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 SPATA1Q5VX52 437 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 CEP135Q66GS9 1140 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 DCLRE1AQ6PJP8 1040 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 DDX53Q86TM3 631 aaKnown RBP20.23■□□□□ 0.83
DDX54-209ENST00000551912 TLR9Q9NR96 1032 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 ADAM28Q9UKQ2 775 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 FRMD4BQ9Y2L6 1034 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 MTCH2Q9Y6C9 303 aa20.23■□□□□ 0.83
DDX54-209ENST00000551912 TMEM189-UBE2V1I3L0A0 370 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 PODXLO00592 558 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 B3GAT3O94766 335 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 CSPG5O95196 566 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 KIF4AO95239 1232 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 CCNE1P24864 410 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 LRRC63Q05C16 580 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 ADAM9Q13443 819 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 CAMK1Q14012 370 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms