RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
NEK3-203ENST00000551355 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 CEP120Q8N960 986 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 SMG8Q8ND04 991 aaKnown RBP11.24□□□□□ -0.61
NEK3-203ENST00000551355 TAF4BQ92750 862 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 POP1Q99575 1024 aaKnown RBP11.24□□□□□ -0.61
NEK3-203ENST00000551355 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 TMX1Q9H3N1 280 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
NEK3-203ENST00000551355 ELAC1Q9H777 363 aaKnown RBP11.24□□□□□ -0.61
NEK3-203ENST00000551355 RAB20Q9NX57 234 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 MYO6Q9UM54 1294 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 CAPN11Q9UMQ6 739 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
NEK3-203ENST00000551355 CENPFP49454 3210 aa11.24□□□□□ -0.61
NEK3-203ENST00000551355 AKR1B15C9JRZ8 316 aaPredicted RBP11.23□□□□□ -0.61
NEK3-203ENST00000551355 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
NEK3-203ENST00000551355 HOXA2O43364 376 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 RAG1P15918 1043 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 ATICP31939 592 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 ZBED6P86452 979 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 KCNMA1Q12791 1236 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 TRPC3Q13507 836 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 SGSM1Q2NKQ1 1148 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 EPC2Q52LR7 807 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 HS1BP3Q53T59 392 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 KLHDC7AQ5VTJ3 777 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 MFSD5Q6N075 450 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 CNKSR3Q6P9H4 555 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 TRAPPC11Q7Z392 1133 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 ECHDC2Q86YB7 292 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 TMEM192Q8IY95 271 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 DBF4BQ8NFT6 615 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 BEST2Q8NFU1 509 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 JAKMIP2Q96AA8 810 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 RPS6KC1Q96S38 1066 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 CRACR2AQ9BSW2 395 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 LSM14BQ9BX40 385 aaKnown RBP11.23□□□□□ -0.61
NEK3-203ENST00000551355 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
NEK3-203ENST00000551355 WNT8AQ9H1J5 351 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 FAM207AQ9NSI2 230 aaPredicted RBP11.23□□□□□ -0.61
NEK3-203ENST00000551355 CEP72Q9P209 647 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 APEX2Q9UBZ4 518 aa11.23□□□□□ -0.61
NEK3-203ENST00000551355 UBQLN1Q9UMX0 589 aaKnown RBP11.23□□□□□ -0.61
NEK3-203ENST00000551355 ABHD14A-ACY1A0A1B0GW23 586 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 C9IYK1 514 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 INPPL1O15357 1258 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 MGEA5O60502 916 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 CCDC172P0C7W6 258 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 UCHL3P15374 230 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 PAX3P23760 479 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 AKAP5P24588 427 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 CYP2C18P33260 490 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
NEK3-203ENST00000551355 PIK3CAP42336 1068 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 CCL23P55773 120 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 RBP5P82980 135 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 NCOA4Q13772 614 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 IKBKEQ14164 716 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 GPNMBQ14956 572 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 ZBTB6Q15916 424 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
NEK3-203ENST00000551355 LMO3Q8TAP4 145 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 ZNF516Q92618 1163 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 SYN2Q92777 582 aaPredicted RBP11.22□□□□□ -0.61
NEK3-203ENST00000551355 NT5C1BQ96P26 610 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 PANX2Q96RD6 677 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 APOL6Q9BWW8 343 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 TTYH3Q9C0H2 523 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 FAM124BQ9H5Z6 455 aaPredicted RBP11.22□□□□□ -0.61
NEK3-203ENST00000551355 RSAD1Q9HA92 442 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 ZNHIT6Q9NWK9 470 aaKnown RBP11.22□□□□□ -0.61
NEK3-203ENST00000551355 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 HES2Q9Y543 173 aa11.22□□□□□ -0.61
NEK3-203ENST00000551355 UMODL1Q5DID0 1318 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 ENPP3O14638 875 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 STAU1O95793 577 aaKnown RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 HLA-DRAP01903 254 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 GYPCP04921 128 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 THP07101 528 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 NFICP08651 508 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 ACTN1P12814 892 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 P4HA1P13674 534 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 ATF7P17544 494 aaPredicted RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 SLC9A1P19634 815 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 CASP14P31944 242 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms