RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 USP27XA6NNY8 438 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 TBKBP1A7MCY6 615 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 K7ENM7 598 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 PER2O15055 1255 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 SLC16A3O15427 465 aaKnown RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 TGFB1I1O43294 461 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 B4GALT3O60512 393 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 RPS6KA5O75582 802 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 NR3C1P04150 777 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 PLS3P13797 630 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 FGFR4P22455 802 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 RPL13P26373 211 aaKnown RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 NHLH1Q02575 133 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 KCNA1Q09470 495 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 NFX1Q12986 1120 aaKnown RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 XKR3Q5GH77 459 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 FIGNQ5HY92 759 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 ZNF484Q5JVG2 852 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 CLLU1OSQ5K130 101 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 MAEAQ7L5Y9 396 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 TRMT1LQ7Z2T5 733 aaKnown RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 ALYREFQ86V81 257 aaKnown RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 NME8Q8N427 588 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 LRRC71Q8N4P6 559 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 PRSS33Q8NF86 280 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 SUSD6Q92537 303 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 IQCDQ96DY2 449 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 CASD1Q96PB1 797 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 SH2D3AQ9BRG2 576 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 NUP58Q9BVL2 599 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 NAA15Q9BXJ9 866 aaKnown RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 TTYH3Q9C0H2 523 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 ST6GALNAC4Q9H4F1 302 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 ABHD10Q9NUJ1 306 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 CAPN11Q9UMQ6 739 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 GINS2Q9Y248 185 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 SIK3Q9Y2K2 1263 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 USP15Q9Y4E8 981 aaPredicted RBP8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 PCDHB13Q9Y5F0 798 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 CACNA1HO95180 2353 aa8.05□□□□□ -1.12
SMARCD1-210ENST00000551352 A0A1W2PQJ5 194 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 TTC26A0AVF1 554 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 MEIS3P2A8K0S8 358 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 HIDE1A8MVS5 230 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 CCP110O43303 1012 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 CSDE1O75534 798 aaKnown RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 DGAT1O75907 488 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 FGF18O76093 207 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 STAG3L1P0CL83 205 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 EPB41P11171 864 aaKnown RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 ALADP13716 330 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 KRT9P35527 623 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 NDUFV1P49821 464 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 KLK7P49862 253 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 SLC26A2P50443 739 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 NCKAP1LP55160 1127 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 DUSP6Q16828 381 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 IER5LQ5T953 404 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 FAM160B1Q5W0V3 765 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 SYCE2Q6PIF2 218 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 HS2ST1Q7LGA3 356 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 FRMD5Q7Z6J6 570 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 KSR1Q8IVT5 923 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 MCPH1Q8NEM0 835 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 GOLGA5Q8TBA6 731 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 KIFAP3Q92845 792 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 PPP1R13BQ96KQ4 1090 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 CEP170P1Q96L14 293 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 PCMTD1Q96MG8 357 aaPredicted RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 DNAJC7Q99615 494 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 GBP3Q9H0R5 595 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 S1PR5Q9H228 398 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 GPRC5CQ9NQ84 441 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 AGPAT3Q9NRZ7 376 aa8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 TRMT1Q9NXH9 659 aaKnown RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 ARMCX3Q9UH62 379 aaPredicted RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMARCD1-210ENST00000551352 VWA8A3KMH1 1905 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 SOWAHDA6NJG2 315 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 M0QZ92 97 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 CLIC2O15247 247 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 NCK2O43639 380 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 AKAP3O75969 853 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 PDGFBP01127 241 aaPredicted RBP8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 OATP04181 439 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 RPLP2P05387 115 aaKnown RBP8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 TRIM21P19474 475 aaKnown RBP8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 CASP4P49662 377 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 GPC3P51654 580 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 CRYBB1P53674 252 aaPredicted RBP8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 PEX3P56589 373 aa8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 NLRP11P59045 1033 aaKnown RBP8.03□□□□□ -1.12
SMARCD1-210ENST00000551352 GTF2BQ00403 316 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms