RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 DCNP07585 359 aaKnown RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 LIG1P18858 919 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 CCT6AP40227 531 aaKnown RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 GPC5P78333 572 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 HMGN5P82970 282 aaKnown RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 PFKPQ01813 784 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 PRKCQQ04759 706 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 XKR4Q5GH76 650 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 TTC38Q5R3I4 469 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 RSPO2Q6UXX9 243 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 C1orf210Q8IVY1 113 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 DDX27Q96GQ7 796 aaKnown RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 BORCS6Q96GS4 357 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 DDX23Q9BUQ8 820 aaKnown RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 OSBPL6Q9BZF3 934 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 RAB34Q9BZG1 259 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 BHMT2Q9H2M3 363 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 AVENQ9NQS1 362 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 TOPORSQ9NS56 1045 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-221ENST00000550914 SLC38A7Q9NVC3 462 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 USP20Q9Y2K6 914 aa14.13□□□□□ -0.15
PTCH1-221ENST00000550914 DNAH14Q0VDD8 3507 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 GRM5P41594 1212 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 MAGEA9P43362 315 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 ID4P47928 161 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 CLCNKBP51801 687 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 YARSP54577 528 aaKnown RBP14.12□□□□□ -0.15
PTCH1-221ENST00000550914 NTHL1P78549 312 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 ECM1Q16610 540 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 PABPC1LQ4VXU2 614 aaKnown RBP14.12□□□□□ -0.15
PTCH1-221ENST00000550914 SPECC1Q5M775 1068 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 CD300LGQ6UXG3 332 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 ALKAL1Q6UXT8 129 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 C4orf32Q8N8J7 132 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 IGSF22Q8N9C0 903 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 ITFG1Q8TB96 612 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 RPP25Q9BUL9 199 aaKnown RBP14.12□□□□□ -0.15
PTCH1-221ENST00000550914 KIFC3Q9BVG8 833 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 CCDC94Q9BW85 323 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-221ENST00000550914 TMEM134Q9H6X4 195 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 GDE1Q9NZC3 331 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 LRWD1Q9UFC0 647 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 NOL7Q9UMY1 257 aaKnown RBP14.12□□□□□ -0.15
PTCH1-221ENST00000550914 POLIQ9UNA4 740 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 KIAA1024Q9UPX6 916 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 CDY1Q9Y6F8 540 aa14.12□□□□□ -0.15
PTCH1-221ENST00000550914 ARHGEF37A1IGU5 675 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 SP9P0CG40 484 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 TKTP29401 623 aaKnown RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 GNL2Q13823 731 aaKnown RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 MLF2Q15773 248 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 ZNF528Q3MIS6 628 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 GLRA4Q5JXX5 417 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 SLC8B1Q6J4K2 584 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 CCDC83Q8IWF9 413 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 NPAS3Q8IXF0 933 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 ZNF461Q8TAF7 563 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 KCNG4Q8TDN1 519 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 ACO2Q99798 780 aaKnown RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 FOXQ1Q9C009 403 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 C17orf75Q9HAS0 396 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 PTPRHQ9HD43 1115 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 DDX19AQ9NUU7 478 aaKnown RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
PTCH1-221ENST00000550914 DNMT3BQ9UBC3 853 aaKnown RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 RBM19Q9Y4C8 960 aaKnown RBP14.11□□□□□ -0.15
PTCH1-221ENST00000550914 LAD1O00515 517 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 SYN3O14994 580 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 ECI2O75521 394 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 ABLIM3O94929 683 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 GLULP15104 373 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 KCNE1P15382 129 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 U2AF2P26368 475 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 NPTX2P47972 431 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 DMP1Q13316 513 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 SNW1Q13573 536 aaKnown RBP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 SLC44A4Q53GD3 710 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 ERICH6BQ5W0A0 696 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 C3orf58Q8NDZ4 430 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 DRC1Q96MC2 740 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 MRPL4Q9BYD3 311 aaKnown RBP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 BCO2Q9BYV7 579 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 CDT1Q9H211 546 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 HCFC1R1Q9NWW0 138 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 ARHGAP28Q9P2N2 729 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 DNM3Q9UQ16 869 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 MRPS23Q9Y3D9 190 aaKnown RBP14.1□□□□□ -0.15
PTCH1-221ENST00000550914 R4GN57 208 aa14.1□□□□□ -0.15
PTCH1-221ENST00000550914 NCOR2Q9Y618 2525 aa14.09□□□□□ -0.15
PTCH1-221ENST00000550914 CCDC169A6NNP5 214 aa14.09□□□□□ -0.15
PTCH1-221ENST00000550914 TBC1D4O60343 1298 aa14.09□□□□□ -0.15
PTCH1-221ENST00000550914 MICAL2O94851 1124 aa14.09□□□□□ -0.15
PTCH1-221ENST00000550914 RHOP08100 348 aa14.09□□□□□ -0.15
PTCH1-221ENST00000550914 MCF2P10911 925 aa14.09□□□□□ -0.15
PTCH1-221ENST00000550914 PROZP22891 400 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms