RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GALNT8Q9NY28 637 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 GGA3Q9NZ52 723 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 DOCK1Q14185 1865 aa6.08□□□□□ -1.44
SCAF11-214ENST00000550893 RBBP6Q7Z6E9 1792 aaKnown RBP6.08□□□□□ -1.44
SCAF11-214ENST00000550893 ATRNL1Q5VV63 1379 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 FAM205AQ6ZU69 1335 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 SLC12A8A0AV02 714 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 NPEPPSL1A6NEC2 478 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 FOXN1O15353 648 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 NPTXRO95502 500 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 MPIG6BO95866 241 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 HSPA1AP0DMV8 641 aaKnown RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 HSPA1BP0DMV9 641 aaKnown RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 RPS12P25398 132 aaKnown RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 IL13RA1P78552 427 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 MTX1Q13505 466 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 SLC4A10Q6U841 1118 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 REXO1L1PQ8IX06 675 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 C2orf69Q8N8R5 385 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 TDRD7Q8NHU6 1098 aaKnown RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 DLG3Q92796 817 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 FAM84BQ96KN1 310 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 AMNQ9BXJ7 453 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 JADE2Q9NQC1 790 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 SMC4Q9NTJ3 1288 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 NOB1Q9ULX3 412 aaKnown RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 PA2G4Q9UQ80 394 aaKnown RBP6.07□□□□□ -1.44
SCAF11-214ENST00000550893 JAG2Q9Y219 1238 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 PTPN22Q9Y2R2 807 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 LOC285556D6RIA3 1793 aa6.07□□□□□ -1.44
SCAF11-214ENST00000550893 WNT10BO00744 389 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 GPR42O15529 346 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 DNAJC8O75937 253 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 CNOT4O95628 575 aaKnown RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 CT47B1P0C2W7 299 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 ZNF888P0CJ79 500 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 ZBTB48P10074 688 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 GYG1P46976 350 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 TOP3AQ13472 1001 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 TMEM132BQ14DG7 1078 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 WDR72Q3MJ13 1102 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 STRIP1Q5VSL9 837 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 LRSAM1Q6UWE0 723 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 DBX2Q6ZNG2 339 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 MOB2Q70IA6 237 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 PNMA8AQ86V59 439 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 C16orf71Q8IYS4 520 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 AGBL3Q8NEM8 1001 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 ASB15Q8WXK1 588 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 COA1Q9GZY4 146 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 FZD1Q9UP38 647 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 LRRFIP2Q9Y608 721 aaKnown RBP6.06□□□□□ -1.44
SCAF11-214ENST00000550893 NAV1Q8NEY1 1877 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 PARP14Q460N5 1801 aa6.06□□□□□ -1.44
SCAF11-214ENST00000550893 PNMA6EA0A0J9YXQ4 647 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 ANKRD18BA2A2Z9 1011 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 M0R2C6 588 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 FOXP2O15409 715 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 GLRX3O76003 335 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 HSPA8P11142 646 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 ADORA1P30542 326 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 IGFALSP35858 605 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 MECP2P51608 486 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 ADAM17P78536 824 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 IRF9Q00978 393 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 IFIT5Q13325 482 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 USP10Q14694 798 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 TNIP1Q15025 636 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 STILQ15468 1287 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 ZCCHC8Q6NZY4 707 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 OTOP1Q7RTM1 612 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 DDX53Q86TM3 631 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 TMEM57Q8N5G2 664 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 TTC9BQ8N6N2 239 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 CDCA5Q96FF9 252 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 WNK4Q96J92 1243 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 C8orf49Q96NF6 230 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 EYA3Q99504 573 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 BTBD2Q9BX70 525 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 MEGF9Q9H1U4 602 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 MYOZ2Q9NPC6 264 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 SAMD15Q9P1V8 674 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 ST6GALNAC2Q9UJ37 374 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 TNPO3Q9Y5L0 923 aaKnown RBP6.05□□□□□ -1.44
SCAF11-214ENST00000550893 SLC4A7Q9Y6M7 1214 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 MGAMO43451 1857 aa6.05□□□□□ -1.44
SCAF11-214ENST00000550893 PLXNB2O15031 1838 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 KIF16BQ96L93 1317 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 WDR33Q9C0J8 1336 aaKnown RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 MYH1P12882 1939 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 RLFQ13129 1914 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 GREB1LQ9C091 1923 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-214ENST00000550893 CUTAO60888 179 aa6.04□□□□□ -1.44
SCAF11-214ENST00000550893 HIP1RO75146 1068 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms