RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 CNOT6LQ96LI5 555 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 RNPC3Q96LT9 517 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 POP1Q99575 1024 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 THAP9Q9H5L6 903 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 KIAA1586Q9HCI6 787 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 LRFN2Q9ULH4 789 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 INPP5FQ9Y2H2 1132 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 FRMD4BQ9Y2L6 1034 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 SMIM28A0A1B0GU29 152 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 LCHNA4D1U4 455 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 LRRIQ3A6PVS8 624 aaPredicted RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 GJB5O95377 273 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 POMCP01189 267 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 EPB41P11171 864 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 ATP1A3P13637 1013 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 IGFBP6P24592 240 aaPredicted RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 RABGGTBP53611 331 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 MARSP56192 900 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 POU5F1Q01860 360 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 PPP2R3AQ06190 1150 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 PAN2Q504Q3 1202 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 NOMO2Q5JPE7 1267 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 GLB1LQ6UWU2 654 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 APTXQ7Z2E3 356 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 TRIM59Q8IWR1 403 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 HACE1Q8IYU2 909 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 RNF214Q8ND24 703 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 CCDC127Q96BQ5 260 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 SLC9A7Q96T83 725 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 NAT10Q9H0A0 1025 aaKnown RBP14.65□□□□□ -0.06
ERBB3-215ENST00000550828 TMEM117Q9H0C3 514 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 RBSNQ9H1K0 784 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 PLEKHA5Q9HAU0 1116 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 PRDM6Q9NQX0 595 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 TBC1D13Q9NVG8 400 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 TUBGCP4Q9UGJ1 667 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 CHD7Q9P2D1 2997 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 CHD9Q3L8U1 2897 aa14.65□□□□□ -0.06
ERBB3-215ENST00000550828 MYO9BQ13459 2157 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 TBKBP1A7MCY6 615 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 DDHD2O94830 711 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 IL18RAPO95256 599 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 LINC00271P0C7V0 271 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 MYOGP15173 224 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 YARSP54577 528 aaKnown RBP14.64□□□□□ -0.07
ERBB3-215ENST00000550828 CLDN10P78369 228 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 PPP3CAQ08209 521 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 BFSP1Q12934 665 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 FRMD5Q7Z6J6 570 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 ZNF280BQ86YH2 543 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 CXorf38Q8TB03 319 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 TMC2Q8TDI7 906 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 SLC35C1Q96A29 364 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 KIF12Q96FN5 646 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 CGRRF1Q99675 332 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 GOLGA2P5Q9HBQ8 144 aa14.64□□□□□ -0.07
ERBB3-215ENST00000550828 COL4A4P53420 1690 aaPredicted RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 KCNJ18B7U540 433 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 DLATP10515 647 aaKnown RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 VAMP7P51809 220 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 DSC1Q08554 894 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 GRIK3Q13003 919 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 KCNJ12Q14500 433 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 TMEM132DQ14C87 1099 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 TPD52L1Q16890 204 aaPredicted RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 CCDC40Q4G0X9 1142 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 C15orf39Q6ZRI6 1047 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 SPRED2Q7Z698 418 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 PHOSPHO2Q8TCD6 241 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 RPS6KC1Q96S38 1066 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 PAAF1Q9BRP4 392 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 MTMR12Q9C0I1 747 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 MTIF3Q9H2K0 278 aaKnown RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 ASB7Q9H672 318 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 CWH43Q9H720 699 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 NRDE2Q9H7Z3 1164 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 UBN1Q9NPG3 1134 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 INTS13Q9NVM9 706 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 DNAJB4Q9UDY4 337 aa14.63□□□□□ -0.07
ERBB3-215ENST00000550828 ARMCX3Q9UH62 379 aaPredicted RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 MRPL42Q9Y6G3 142 aaKnown RBP14.63□□□□□ -0.07
ERBB3-215ENST00000550828 F8W810 466 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 PPEF2O14830 753 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 HOXA2O43364 376 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 CAVIN2O95810 425 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 PBX2P40425 430 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 ENPEPQ07075 957 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 KRT31Q15323 416 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 CBWD6Q4V339 395 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 TCP11X2Q5H9J9 407 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 CBWD3Q5JTY5 395 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 MIIPQ5JXC2 388 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 CBWD5Q5RIA9 395 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 INTS8Q75QN2 995 aaKnown RBP14.62□□□□□ -0.07
ERBB3-215ENST00000550828 WDR49Q8IV35 697 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms