RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 LRRIQ4A6NIV6 560 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 HMGB1P1B2RPK0 211 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SUPT20HL2P0C7V6 817 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SCP2P22307 547 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 GLRA2P23416 452 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 RRM1P23921 792 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 CTNNA2P26232 953 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 MDH1P40925 334 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SIX1Q15475 284 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 ODF2Q5BJF6 829 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 XKR3Q5GH77 459 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 LRIG3Q6UXM1 1119 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 PRRT2Q7Z6L0 340 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 ERO1BQ86YB8 467 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 PASD1Q8IV76 773 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 HERPUD2Q9BSE4 406 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 TXLNGYQ9BZA5 131 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 RAB17Q9H0T7 212 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 APOBEC3GQ9HC16 384 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 ANKFY1Q9P2R3 1169 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 FBXO40Q9UH90 709 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 GTF3C4Q9UKN8 822 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 NDUFAB1O14561 156 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 PHF2O75151 1096 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 MTA2O94776 668 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 VNN1O95497 513 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 C4BPAP04003 597 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 HARSP12081 509 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 UNGP13051 313 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 GARTP22102 1010 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 NF2P35240 595 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 BIRC3Q13489 604 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SNX1Q13596 522 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 GPR162Q16538 588 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 MIS18BP1Q6P0N0 1132 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 GADL1Q6ZQY3 521 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 C15orf39Q6ZRI6 1047 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SLC13A5Q86YT5 568 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 PSPC1Q8WXF1 523 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SEMA4AQ9H3S1 761 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 PPANQ9NQ55 473 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 ANAPC7Q9UJX3 599 aa15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 AGO2Q9UKV8 859 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-218ENST00000550804 SPDYE5A6NIY4 337 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 EXTL3O43909 919 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 PPFIA2O75334 1257 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 GJB6O95452 261 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 HLA-DRAP01903 254 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 MAGOHP61326 146 aaKnown RBP15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 GNPTABQ3T906 1256 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 EMC10Q5UCC4 262 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 CCDC105Q8IYK2 499 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 FNBP1Q96RU3 617 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 ZNF302Q9NR11 478 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 MAFBQ9Y5Q3 323 aaPredicted RBP15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 SYNGAP1Q96PV0 1343 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 K7ERI5 159 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 EBAG9O00559 213 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 CAND2O75155 1236 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 CLSTN1O94985 981 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 GTF2H1P32780 548 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 STXBP2Q15833 593 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 KRT71Q3SY84 523 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 ZACNQ401N2 412 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 EAPPQ56P03 285 aaPredicted RBP15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 SEL1L2Q5TEA6 688 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 MCOLN2Q8IZK6 566 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 OR5B17Q8NGF7 314 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 MDM1Q8TC05 714 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 PCYT2Q99447 389 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 FAM118BQ9BPY3 351 aa15.17■□□□□ 0.02
CALCOCO1-218ENST00000550804 NFASCO94856 1347 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 TLDC2A0PJX2 215 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 SMIM23A6NLE4 172 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 CXCL11O14625 94 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 MAPK4P31152 587 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 CHRNA3P32297 505 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 COILP38432 576 aaPredicted RBP15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 GCNT1Q02742 428 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 DHX34Q14147 1143 aaKnown RBP15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 SLC29A2Q14542 456 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 CHST13Q8NET6 341 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 C1orf112Q9NSG2 853 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 PCYOX1Q9UHG3 505 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 MROH7Q68CQ1 1323 aa15.16■□□□□ 0.02
CALCOCO1-218ENST00000550804 FAM187AA6NFU0 413 aa15.15■□□□□ 0.02
CALCOCO1-218ENST00000550804 PMS2P54278 862 aa15.15■□□□□ 0.02
CALCOCO1-218ENST00000550804 RWDD2BP57060 319 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms