RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 GRM5P41594 1212 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 MAGEA1P43355 309 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
CACNB3-217ENST00000550483 IFI16Q16666 785 aaKnown RBP13.55□□□□□ -0.24
CACNB3-217ENST00000550483 CCDC122Q5T0U0 273 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 PPM1KQ8N3J5 372 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
CACNB3-217ENST00000550483 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 TAS1R2Q8TE23 839 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 UBE2Q2Q8WVN8 375 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 SHC3Q92529 594 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 LENG1Q96BZ8 264 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-217ENST00000550483 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-217ENST00000550483 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 C2CD2Q9Y426 696 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
CACNB3-217ENST00000550483 DOCK3Q8IZD9 2030 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 EVI5O60447 810 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 HLA-DRAP01903 254 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 ATICP31939 592 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 GNG11P61952 73 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 KIZQ2M2Z5 673 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 SGSM1Q2NKQ1 1148 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 ZNF677Q86XU0 584 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 FAM71AQ8IYT1 594 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 HELQQ8TDG4 1101 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 SH3TC2Q8TF17 1288 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 ACAP3Q96P50 834 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 ALS2CR12Q96Q35 445 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-217ENST00000550483 LZTFL1Q9NQ48 299 aa13.54□□□□□ -0.24
CACNB3-217ENST00000550483 TOPORSQ9NS56 1045 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-217ENST00000550483 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
CACNB3-217ENST00000550483 TREHO43280 583 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 B4GALT5O43286 388 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 PGK1P00558 417 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ASGR1P07306 291 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 STAG3L1P0CL83 205 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 CASQ1P31415 396 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ARHGAP25P42331 645 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 MRPS6P82932 125 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 APBA1Q02410 837 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 PTK2Q05397 1052 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 TRPC3Q13507 836 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 NCOA4Q13772 614 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 SNX17Q15036 470 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 NAB2Q15742 525 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 EEF1DP3Q658K8 133 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 CCSAPQ6IQ19 270 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 SYT10Q6XYQ8 523 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ARRDC4Q8NCT1 418 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 DNAJB3Q8WWF6 145 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ZNF516Q92618 1163 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 DPF3Q92784 378 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 SEMA4DQ92854 862 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 SECISBP2LQ93073 1101 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 GPR88Q9GZN0 384 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
CACNB3-217ENST00000550483 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 MROH7Q68CQ1 1323 aa13.53□□□□□ -0.24
CACNB3-217ENST00000550483 ANO9A1A5B4 782 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 MYADML2A6NDP7 307 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 TACC1O75410 805 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 PLEKP08567 350 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 IQCF3P0C7M6 154 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 P4HA1P13674 534 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ELNP15502 786 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 CCND3P30281 292 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 GRK4P32298 578 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 TNFSF9P41273 254 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 PDE6CP51160 858 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 NOP14P78316 857 aaKnown RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ARID5AQ03989 594 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 KCNA10Q16322 511 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ZBTB41Q5SVQ8 909 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ALKBH5Q6P6C2 394 aaKnown RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF571Q7Z3V5 609 aaPredicted RBP13.52□□□□□ -0.25
CACNB3-217ENST00000550483 SERINC5Q86VE9 423 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms