RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 ACTRT1Q8TDG2 376 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 S100BP04271 92 aaPredicted RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 MAP4P27816 1152 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 YTHDF3Q7Z739 585 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 KLF6Q99612 283 aaPredicted RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 ASCC2Q9H1I8 757 aaPredicted RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 MANSC1Q9H8J5 431 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 IVNS1ABPQ9Y6Y0 642 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 BCAR1P56945 870 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 SNAP25P60880 206 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 KIAA2013Q8IYS2 634 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 RYBPQ8N488 228 aaPredicted RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 MAGEB18Q96M61 343 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 ZC4H2Q9NQZ6 224 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 CHCHD3Q9NX63 227 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 ARHGAP20Q9P2F6 1191 aa16.68■□□□□ 0.26
RBFOX1-212ENST00000550418 NMT1P30419 496 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 PRAMEP78395 509 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 PDIA6Q15084 440 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 TTI2Q6NXR4 508 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 DHX38Q92620 1227 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 FAM213AQ9BRX8 229 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 PALMDQ9NP74 551 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 TULP2O00295 520 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 ATP6V1B1P15313 513 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 CCT7Q99832 543 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 RXFP1Q9HBX9 757 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 PARVAQ9NVD7 372 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 UBE4BO95155 1302 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 SEC24DO94855 1032 aaPredicted RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 SYF2O95926 243 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 FNTAP49354 379 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 SLC30A5Q8TAD4 765 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 CMTM5Q96DZ9 223 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 CDHR1Q96JP9 859 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 MAP2P11137 1827 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 ABCB11O95342 1321 aa16.67■□□□□ 0.26
RBFOX1-212ENST00000550418 ZSCAN5CA6NGD5 496 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 EYA4O95677 639 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 IL10P22301 178 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 TBXAS1P24557 533 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 OSTNP61366 133 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 ACBD5Q5T8D3 534 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 AGR3Q8TD06 166 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 DCPSQ96C86 337 aaKnown RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 SCHIP1Q9P0W5 487 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 ZNF229Q9UJW7 825 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 TSC22D4Q9Y3Q8 395 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 MIS18BP1Q6P0N0 1132 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 SLC13A5Q86YT5 568 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 RCOR2Q8IZ40 523 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 HEY2Q9UBP5 337 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 EN1Q05925 392 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 MAPRE2Q15555 327 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 LRRC8EQ6NSJ5 796 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 HACE1Q8IYU2 909 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 CELF1Q92879 486 aaKnown RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 KLHL8Q9P2G9 620 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 F8VZ95 297 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 CA8P35219 290 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 TMTC4Q5T4D3 741 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 PRPF39Q86UA1 669 aaKnown RBP16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 GALNT4Q8N4A0 578 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
RBFOX1-212ENST00000550418 DENND3A2RUS2 1198 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 ZNF200P98182 395 aaPredicted RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 DALRD3Q5D0E6 543 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 RSPH3Q86UC2 560 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 EIF2AK1Q9BQI3 630 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 IL1RAPL1Q9NZN1 696 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 CSADQ9Y600 493 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 C3orf62Q6ZUJ4 267 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 MCPH1Q8NEM0 835 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 DEAF1O75398 565 aaPredicted RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 MMP10P09238 476 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 PTK7Q13308 1070 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 PBXIP1Q96AQ6 731 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 LRRC4Q9HBW1 653 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 PKD2L2Q9NZM6 624 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 ARHGAP26Q9UNA1 814 aa16.65■□□□□ 0.26
RBFOX1-212ENST00000550418 CHMP2BQ9UQN3 213 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms