RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 HPS3Q969F9 1004 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 MVB12AQ96EY5 273 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 PHACTR3Q96KR7 559 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 VRK1Q99986 396 aaPredicted RBP6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 C11orf54Q9H0W9 315 aaPredicted RBP6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 SLC12A5Q9H2X9 1139 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 FBXO34Q9NWN3 711 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 AURKAIP1Q9NWT8 199 aaPredicted RBP6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 CEP72Q9P209 647 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 SORCS3Q9UPU3 1222 aa6.27□□□□□ -1.41
GNPTAB-207ENST00000550352 PRPF3O43395 683 aaKnown RBP6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 AP1G1O43747 822 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 FAM20BO75063 409 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 POMCP01189 267 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 RPLP2P05387 115 aaKnown RBP6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 C1SP09871 688 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 MGAT1P26572 445 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 DGCR2P98153 550 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 CREMQ03060 361 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 RAB39AQ14964 217 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 PGS1Q32NB8 556 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 ATAT1Q5SQI0 421 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 GRAMD1CQ8IYS0 662 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 CALCOCO1Q9P1Z2 691 aa6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 EIF2B4Q9UI10 523 aaKnown RBP6.26□□□□□ -1.41
GNPTAB-207ENST00000550352 KIAA0391O15091 583 aaKnown RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 TSPAN6O43657 245 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 OFD1O75665 1012 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 SCAF4O95104 1147 aaKnown RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 SBK3P0C264 359 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 LPOP22079 712 aaPredicted RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 SLC6A2P23975 617 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 RNASE9P60153 205 aaKnown RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 SNAPC2Q13487 334 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 UBXN2BQ14CS0 331 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 RABL3Q5HYI8 236 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 METRNLQ641Q3 311 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 MED25Q71SY5 747 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 EPM2AIP1Q7L775 607 aaPredicted RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 CPT1CQ8TCG5 803 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 TSR2Q969E8 191 aaKnown RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 AIFM3Q96NN9 605 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 PLEKHG4BQ96PX9 1271 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 NEU1Q99519 415 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 MAP3K14Q99558 947 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 ZNF703Q9H7S9 590 aaPredicted RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 METTL14Q9HCE5 456 aaKnown RBP6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 ANLNQ9NQW6 1124 aa6.25□□□□□ -1.41
GNPTAB-207ENST00000550352 GRM6O15303 877 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 FTLP02792 175 aaPredicted RBP6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 AMHP03971 560 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 ITGB1P05556 798 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 CD1AP06126 327 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 MALP21145 153 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 SLC25A3Q00325 362 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 FOXE3Q13461 319 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 ATP2B3Q16720 1220 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 FAM102BQ5T8I3 360 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 FAM102AQ5T9C2 384 aaPredicted RBP6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 C3orf20Q8ND61 904 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 CACTINQ8WUQ7 758 aaKnown RBP6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 RGMAQ96B86 450 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 CLIP3Q96DZ5 547 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 TEX101Q9BY14 249 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 GSTO2Q9H4Y5 243 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 ZNF768Q9H5H4 540 aaKnown RBP6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 NMRK2Q9NPI5 230 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 PARPBPQ9NWS1 579 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 TRPM5Q9NZQ8 1165 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 FAM30AQ9NZY2 134 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 PCDHA3Q9Y5H8 950 aa6.24□□□□□ -1.41
GNPTAB-207ENST00000550352 AHRRA9YTQ3 701 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 TRIM24O15164 1050 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 ZNF185O15231 689 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 PRSS23O95084 383 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 HSPA6P17066 643 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 SLC6A4P31645 630 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 MAP2K6P52564 334 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 NOGQ13253 232 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 GTF2H3Q13889 308 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 PUM1Q14671 1186 aaKnown RBP eCLIP6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 ZXDCQ2QGD7 858 aaPredicted RBP6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 PABPC1LQ4VXU2 614 aaKnown RBP6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 B3GNT9Q6UX72 402 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 MYRFQ9Y2G1 1151 aa6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 USP15Q9Y4E8 981 aaPredicted RBP6.23□□□□□ -1.41
GNPTAB-207ENST00000550352 MATN3O15232 486 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 SLC16A6O15403 523 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 RECQL4O94761 1208 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 ALDH2P05091 517 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 ALAS1P13196 640 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 HK3P52790 923 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 FAM189BP81408 668 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 PDCD4Q53EL6 469 aaKnown RBP6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 THEMIS2Q5TEJ8 643 aa6.22□□□□□ -1.41
GNPTAB-207ENST00000550352 NXNQ6DKJ4 435 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms