RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ADRB2P07550 413 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 NFICP08651 508 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 KCNE1P15382 129 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 PPM1AP35813 382 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 BRCC3P46736 316 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 UBE3AQ05086 875 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 ADAM15Q13444 863 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 PNOCQ13519 176 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 HSP90AA2PQ14568 343 aaPredicted RBP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 PTPN14Q15678 1187 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 CLUL1Q15846 466 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 ZBTB6Q15916 424 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 TIGD5Q53EQ6 642 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 HACE1Q8IYU2 909 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 CEP57L1Q8IYX8 460 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 MRPL43Q8N983 215 aaKnown RBP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 ZNF507Q8TCN5 953 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 MICAL1Q8TDZ2 1067 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 HVCN1Q96D96 273 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 TMEM169Q96HH4 297 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 FAM193BQ96PV7 902 aaPredicted RBP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 ACCSQ96QU6 501 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 MAGEF1Q9HAY2 307 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 ENTPD7Q9NQZ7 604 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 BARX2Q9UMQ3 279 aaPredicted RBP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 ANK1P16157 1881 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 PDCD11Q14690 1871 aaKnown RBP12.23□□□□□ -0.45
RAB5B-208ENST00000550283 PTPRJQ12913 1337 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 C2CD2LO14523 706 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 ADAM12O43184 909 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 CLASP2O75122 1294 aaKnown RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 CXCL14O95715 111 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 CLTAP09496 248 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 CTSAP10619 480 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 KCNA5P22460 613 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 DUSP6Q16828 381 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 UPP1Q16831 310 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 KIAA0319Q5VV43 1072 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 JADE1Q6IE81 842 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 LLGL2Q6P1M3 1020 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 FUT10Q6P4F1 479 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 PRSS55Q6UWB4 352 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 RSPO2Q6UXX9 243 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 EFCAB13Q8IY85 973 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 SMYD4Q8IYR2 804 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 NECAB3Q96P71 396 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 FAM213AQ9BRX8 229 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 HERC2P3Q9BVR0 1158 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 GZF1Q9H116 711 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 CLDND1Q9NY35 253 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 KCNG1Q9UIX4 513 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 ADAM28Q9UKQ2 775 aa12.22□□□□□ -0.45
RAB5B-208ENST00000550283 AGO2Q9UKV8 859 aaKnown RBP12.22□□□□□ -0.45
RAB5B-208ENST00000550283 VWA8A3KMH1 1905 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.45
RAB5B-208ENST00000550283 PVALEFA0A1B0GWK0 134 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 CLIC2O15247 247 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 SOD2P04179 222 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 CNPP09543 421 aaKnown RBP12.21□□□□□ -0.45
RAB5B-208ENST00000550283 EPCAMP16422 314 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.45
RAB5B-208ENST00000550283 AMPD3Q01432 767 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 KRT17Q04695 432 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 EP400NLQ6ZTU2 488 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 CBWD2Q8IUF1 395 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 TMEM87AQ8NBN3 555 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 PLEKHO2Q8TD55 490 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 RSPH1Q8WYR4 309 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 POMGNT1Q8WZA1 660 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 HLA-CQ95604 372 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
RAB5B-208ENST00000550283 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 APOL5Q9BWW9 433 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 TLE6Q9H808 572 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 AGPAT3Q9NRZ7 376 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 THEGQ9P2T0 379 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 MAPK8IP1Q9UQF2 711 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 PCDHB13Q9Y5F0 798 aa12.21□□□□□ -0.45
RAB5B-208ENST00000550283 CITO14578 2027 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 PODXLO00592 558 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 SPTLC1O15269 473 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 BMP1P13497 986 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 TKTP29401 623 aaKnown RBP12.2□□□□□ -0.46
RAB5B-208ENST00000550283 CA8P35219 290 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 SMC1AQ14683 1233 aaKnown RBP12.2□□□□□ -0.46
RAB5B-208ENST00000550283 BMT2Q1RMZ1 405 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 LMBRD2Q68DH5 695 aaPredicted RBP12.2□□□□□ -0.46
RAB5B-208ENST00000550283 GLYCTKQ8IVS8 523 aa12.2□□□□□ -0.46
RAB5B-208ENST00000550283 SYCP3Q8IZU3 236 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms