RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 CDK17Q00537 523 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
CACNB3-213ENST00000550064 ASIC2Q16515 512 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 DUOXA2Q1HG44 320 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 SCARA3Q6AZY7 606 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 TATDN2Q93075 761 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 NT5C1BQ96P26 610 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 PI4K2AQ9BTU6 479 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-213ENST00000550064 ASB7Q9H672 318 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
CACNB3-213ENST00000550064 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-213ENST00000550064 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
CACNB3-213ENST00000550064 GPR182O15218 404 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 TNNC2P02585 160 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 PLEKP08567 350 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 NFICP08651 508 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 TMEM191BP0C7N4 346 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 GHRP10912 638 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 RFX1P22670 979 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 CD52P31358 61 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 STAT1P42224 750 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 LPIN1Q14693 890 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 DRAP1Q14919 205 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 PKN2Q16513 984 aaKnown RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 ARHGAP44Q17R89 818 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 TWF2Q6IBS0 349 aaKnown RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 JADE1Q6IE81 842 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 TOGARAM2Q6ZUX3 1019 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 HELQQ8TDG4 1101 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 KAT5Q92993 513 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 MTMR12Q9C0I1 747 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
CACNB3-213ENST00000550064 CHST12Q9NRB3 414 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 HES2Q9Y543 173 aa13.08□□□□□ -0.32
CACNB3-213ENST00000550064 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 F8VZ95 297 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 CD4P01730 458 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 SERPING1P05155 500 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 PNMA6AP0CW24 399 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 AKAP5P24588 427 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 SOX5P35711 763 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 EIF4A3P38919 411 aaKnown RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 ARID5AQ03989 594 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 PAK2Q13177 524 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 NCOA4Q13772 614 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 IRF2BP2Q7Z5L9 587 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 CD302Q8IX05 232 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 CCAR2Q8N163 923 aaKnown RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 SNX27Q96L92 541 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 KREMEN1Q96MU8 473 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 DESI2Q9BSY9 194 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 CXCL16Q9H2A7 254 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 KCND1Q9NSA2 647 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 IPPQ9Y573 584 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 EPN1Q9Y6I3 576 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-213ENST00000550064 SQORQ9Y6N5 450 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
CACNB3-213ENST00000550064 FOXN3O00409 490 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-213ENST00000550064 RECQL4O94761 1208 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 GFPT2O94808 682 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 FERP16591 822 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 MFAP3P55082 362 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 TRPC3Q13507 836 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 DSC3Q14574 896 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 SPOPLQ6IQ16 392 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 NT5DC4Q86YG4 428 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 CCDC170Q8IYT3 715 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms