RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 SURF1Q15526 300 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 VPS52Q8N1B4 723 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 KIAA0895Q8NCT3 520 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 BEST2Q8NFU1 509 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 CACTINQ8WUQ7 758 aaKnown RBP16.25■□□□□ 0.19
GPN3-206ENST00000549963 CBWD1Q9BRT8 395 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 IKZF4Q9H2S9 585 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 AGPAT3Q9NRZ7 376 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 ADAM28Q9UKQ2 775 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 UBQLN1Q9UMX0 589 aaKnown RBP16.25■□□□□ 0.19
GPN3-206ENST00000549963 CHD7Q9P2D1 2997 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 TRANK1O15050 2925 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
GPN3-206ENST00000549963 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 CLIC2O15247 247 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 FAM189A1O60320 539 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 CXCL14O95715 111 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 ADRB2P07550 413 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 CYP3A5P20815 502 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 HOXD13P35453 343 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 SMC1AQ14683 1233 aaKnown RBP16.24■□□□□ 0.19
GPN3-206ENST00000549963 TMEM132DQ14C87 1099 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 ZNF658Q5TYW1 1059 aaPredicted RBP16.24■□□□□ 0.19
GPN3-206ENST00000549963 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 NT5DC4Q86YG4 428 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
GPN3-206ENST00000549963 XXYLT1Q8NBI6 393 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 SAAL1Q96ER3 474 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 TCF25Q9BQ70 676 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 RBAKQ9NYW8 714 aaPredicted RBP16.24■□□□□ 0.19
GPN3-206ENST00000549963 HSPBP1Q9NZL4 362 aa16.24■□□□□ 0.19
GPN3-206ENST00000549963 PDCD11Q14690 1871 aaKnown RBP16.23■□□□□ 0.19
GPN3-206ENST00000549963 GOLGA8IPA6NC78 632 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 GOLGA8JA6NMD2 632 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 TGFB1I1O43294 461 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 B4GALT3O60512 393 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 B3GAT3O94766 335 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 CSPG5O95196 566 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 DNAJB1P25685 340 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 RPL13P26373 211 aaKnown RBP16.23■□□□□ 0.19
GPN3-206ENST00000549963 PPP1R2P41236 205 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 CYP2J2P51589 502 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 ERVFC1P60507 584 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 NAB2Q15742 525 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 UPP1Q16831 310 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 USP41Q3LFD5 358 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 ZBTB41Q5SVQ8 909 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 CRELD2Q6UXH1 353 aaPredicted RBP16.23■□□□□ 0.19
GPN3-206ENST00000549963 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 SPATA20Q8TB22 786 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 ZMAT2Q96NC0 199 aaKnown RBP16.23■□□□□ 0.19
GPN3-206ENST00000549963 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 TLE6Q9H808 572 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 MRPL17Q9NRX2 175 aaKnown RBP16.23■□□□□ 0.19
GPN3-206ENST00000549963 LMBRD1Q9NUN5 540 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
GPN3-206ENST00000549963 C2CD2Q9Y426 696 aa16.23■□□□□ 0.19
GPN3-206ENST00000549963 SF3B1O75533 1304 aaKnown RBP eCLIP16.22■□□□□ 0.19
GPN3-206ENST00000549963 EXOC3O60645 756 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 SOD2P04179 222 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 URODP06132 367 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 PAX3P23760 479 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 CLCNKBP51801 687 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 SPAG1Q07617 926 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 MYBPC2Q14324 1141 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 PLPP4Q5VZY2 271 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 JADE1Q6IE81 842 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 BRSK2Q8IWQ3 736 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 RABGGTAQ92696 567 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 C18orf25Q96B23 403 aaPredicted RBP16.22■□□□□ 0.19
GPN3-206ENST00000549963 MAPK8IP1Q9UQF2 711 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 FRMD4BQ9Y2L6 1034 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 NUB1Q9Y5A7 615 aa16.22■□□□□ 0.19
GPN3-206ENST00000549963 TMEM189-UBE2V1I3L0A0 370 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 PODXLO00592 558 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 FSCN2O14926 492 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 CTSAP10619 480 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 CAMK1Q14012 370 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.19
GPN3-206ENST00000549963 CAMK4Q16566 473 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 TCEAL5Q5H9L2 206 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 FUT10Q6P4F1 479 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 PDXDC1Q6P996 788 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 TMEM173Q86WV6 379 aaPredicted RBP16.21■□□□□ 0.19
GPN3-206ENST00000549963 SLC9A9Q8IVB4 645 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 MRPL43Q8N983 215 aaKnown RBP16.21■□□□□ 0.19
GPN3-206ENST00000549963 RDH13Q8NBN7 331 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.19
GPN3-206ENST00000549963 FNBP1Q96RU3 617 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 CDCA3Q99618 268 aaPredicted RBP16.21■□□□□ 0.19
GPN3-206ENST00000549963 TSG101Q99816 390 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 EMILIN2Q9BXX0 1053 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 ZBP1Q9H171 429 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 GOLGA2P5Q9HBQ8 144 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 MARCH5Q9NX47 278 aa16.21■□□□□ 0.19
GPN3-206ENST00000549963 TRAF3IP3Q9Y228 551 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms