RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 KCNE1P15382 129 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 TXLNAP40222 546 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
HDAC7-229ENST00000549883 LIG4P49917 911 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 YARSP54577 528 aaKnown RBP10.69□□□□□ -0.7
HDAC7-229ENST00000549883 UPP1Q16831 310 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 FAM171A1Q5VUB5 890 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 RSPO2Q6UXX9 243 aaPredicted RBP10.69□□□□□ -0.7
HDAC7-229ENST00000549883 TMC5Q6UXY8 1006 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 CCDC73Q6ZRK6 1079 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 ZNF720Q7Z2F6 126 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 PALB2Q86YC2 1186 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 MAP4K3Q8IVH8 894 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 RXFP1Q9HBX9 757 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 CNTN3Q9P232 1028 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 TUBGCP4Q9UGJ1 667 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 RCOR1Q9UKL0 485 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 A0A0B4J269 797 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 TTC26A0AVF1 554 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 FRMD3A2A2Y4 597 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 CARNS1A5YM72 827 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 FAM86C2PA6NEL3 165 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 LACTBL1A8MY62 500 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 NR1I2O75469 434 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 RFPL2O75678 378 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 B3GAT3O94766 335 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 IDEP14735 1019 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 TKTP29401 623 aaKnown RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 ADSSP30520 456 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 ME1P48163 572 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 WNT7BP56706 349 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 BMS1Q14692 1282 aaKnown RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 CBX2Q14781 532 aaPredicted RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 USP41Q3LFD5 358 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 RESP18Q5W5W9 173 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 KIAA1841Q6NSI8 718 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 GRAMD1CQ8IYS0 662 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 TMEM87AQ8NBN3 555 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 LNX1Q8TBB1 728 aaPredicted RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 FAM84AQ96KN4 292 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 RPGRIP1Q96KN7 1286 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 MSTO1Q9BUK6 570 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 EMILIN2Q9BXX0 1053 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 ADAM7Q9H2U9 754 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 POMKQ9H5K3 350 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 MRPL44Q9H9J2 332 aaKnown RBP10.68□□□□□ -0.7
HDAC7-229ENST00000549883 C11orf16Q9NQ32 467 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 PANK4Q9NVE7 773 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 PRKAG3Q9UGI9 489 aa10.68□□□□□ -0.7
HDAC7-229ENST00000549883 DOCK8Q8NF50 2099 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 SF3B1O75533 1304 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 LOC730098B7Z3J9 87 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 H0YCG3 227 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 PODXLO00592 558 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 PPEF2O14830 753 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 POLR2DO15514 142 aaKnown RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 PRPF6O94906 941 aaKnown RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 CLTAP09496 248 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 HOXB8P17481 243 aaPredicted RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 FGFR3P22607 806 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 HOXD13P35453 343 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 ACOT2P49753 483 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 ZBTB6Q15916 424 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 HERC4Q5GLZ8 1057 aaPredicted RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 SCARA3Q6AZY7 606 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 DCLRE1AQ6PJP8 1040 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 RNF135Q8IUD6 432 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 LEO1Q8WVC0 666 aaPredicted RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 FAM212AQ96EL1 285 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 CLSTN3Q9BQT9 956 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 PHF7Q9BWX1 381 aaPredicted RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 BLZF1Q9H2G9 400 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 ST6GALNAC4Q9H4F1 302 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 MAN1C1Q9NR34 630 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 TOPORSQ9NS56 1045 aaPredicted RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 KBTBD4Q9NVX7 518 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 RAPGEFL1Q9UHV5 662 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 MUTYHQ9UIF7 546 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 KCNG1Q9UIX4 513 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 CPSF3Q9UKF6 684 aaKnown RBP10.67□□□□□ -0.7
HDAC7-229ENST00000549883 FAM50BQ9Y247 325 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 NOTCH4Q99466 2003 aa10.67□□□□□ -0.7
HDAC7-229ENST00000549883 TECTAO75443 2155 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 TMEM189-UBE2V1I3L0A0 370 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 OGTO15294 1046 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 TGM5O43548 720 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 GCNT3O95395 438 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 ADH1AP07327 375 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 NFICP08651 508 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 SRGAP2BP0DMP2 458 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 GAP43P17677 238 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 PSMD5Q16401 504 aa10.66□□□□□ -0.7
HDAC7-229ENST00000549883 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms