RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 BLIDQ8IZY5 108 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 ASAP3Q8TDY4 903 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 DYDC2Q96IM9 177 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 CXCL16Q9H2A7 254 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 ZNF334Q9HCZ1 680 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 XPNPEP1Q9NQW7 623 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 PIAS3Q9Y6X2 628 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 TPRP12270 2363 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 USP24Q9UPU5 2620 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 TDRD15B5MCY1 1934 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 M0R2N6 131 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 PTGESO14684 152 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 MARCH6O60337 910 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 LRG1P02750 347 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 HOXB3P14651 431 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 IFNAR1P17181 557 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 FGFR3P22607 806 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 CCNE1P24864 410 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 CCT2P78371 535 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 EPHA7Q15375 998 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 SF3A2Q15428 464 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 CCDC6Q16204 474 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 INF2Q27J81 1249 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 CEP68Q76N32 757 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 RTL10Q7L3V2 364 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 LONP2Q86WA8 852 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 TPH2Q8IWU9 490 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 FAM160A2Q8N612 972 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 TCEAL4Q96EI5 215 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 ZSWIM3Q96MP5 696 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 CORO1BQ9BR76 489 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 ZSWIM4Q9H7M6 989 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 NCOA5Q9HCD5 579 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 KCNMB3Q9NPA1 279 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 AVENQ9NQS1 362 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 MTRRQ9UBK8 725 aa11.96□□□□□ -0.49
TRAFD1-206ENST00000549358 ASPMQ8IZT6 3477 aa11.96□□□□□ -0.5
TRAFD1-206ENST00000549358 MAP1BP46821 2468 aaKnown RBP11.96□□□□□ -0.5
TRAFD1-206ENST00000549358 NID2Q14112 1375 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 ZMYM2Q9UBW7 1377 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 TM4SF5O14894 197 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 AXIN1O15169 862 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 PROS1P07225 676 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 PSMC3P17980 439 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 GLRA2P23416 452 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 ARL2P36404 184 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 VIPR2P41587 438 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 SPIRE1Q08AE8 756 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 NAB2Q15742 525 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 PRSS36Q5K4E3 855 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 NCAPH2Q6IBW4 605 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 VITQ6UXI7 678 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 C12orf50Q8NA57 414 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 ASB16Q96NS5 453 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 NFKBIZQ9BYH8 718 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 ARRDC1-AS1Q9H2J1 176 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 TRPV5Q9NQA5 729 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 RXFP3Q9NSD7 469 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 RBM12Q9NTZ6 932 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 SNTG2Q9NY99 539 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
TRAFD1-206ENST00000549358 I3L4J1 428 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 K7ESF4 209 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 PRRG1O14668 218 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 ZNF263O14978 683 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 B3GAT3O94766 335 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 SLITRK3O94933 977 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 SEC24BO95487 1268 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 TKTP29401 623 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 ELF1P32519 619 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 CLCNKBP51801 687 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 LIMK1P53667 647 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 PDZD4Q76G19 769 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 ZNF461Q8TAF7 563 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 HAS1Q92839 578 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 SMARCD2Q92925 531 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 JAKMIP1Q96N16 626 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 BACE2Q9Y5Z0 518 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 DOCK6Q96HP0 2047 aa11.94□□□□□ -0.5
TRAFD1-206ENST00000549358 A0A087WWV3 80 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 ARHGEF37A1IGU5 675 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 WDR27A2RRH5 827 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 ZNF197O14709 1029 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 TBX3O15119 743 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 DGAT1O75907 488 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 RECQL4O94761 1208 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 MICAL2O94851 1124 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 C1QTNF9P0C862 333 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 HOXC13P31276 330 aa11.93□□□□□ -0.5
TRAFD1-206ENST00000549358 CCR2P41597 374 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms