RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KAT6AQ92794 2004 aa11.88□□□□□ -0.51
LINC00661-204ENST00000549354 SNCBQ16143 134 aa11.88□□□□□ -0.51
LINC00661-204ENST00000549354 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
LINC00661-204ENST00000549354 ANKRD20A8PQ5CZ79 823 aa11.88□□□□□ -0.51
LINC00661-204ENST00000549354 CYP4F22Q6NT55 531 aa11.88□□□□□ -0.51
LINC00661-204ENST00000549354 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
LINC00661-204ENST00000549354 GEMIN8Q9NWZ8 242 aaKnown RBP11.88□□□□□ -0.51
LINC00661-204ENST00000549354 LRRC37A2A6NM11 1700 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 CHUKO15111 745 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 ATG7O95352 703 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 MYBL1P10243 752 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 CD302Q8IX05 232 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 LRRC34Q8IZ02 419 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 ACTRT1Q8TDG2 376 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
LINC00661-204ENST00000549354 A6NNZ2 444 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 PLS3P13797 630 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 SMTNP53814 917 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 TUBB8Q3ZCM7 444 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
LINC00661-204ENST00000549354 ABHD15Q6UXT9 468 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 FAM47EQ6ZV65 393 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 CYFIP1Q7L576 1253 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 C12orf56Q8IXR9 622 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
LINC00661-204ENST00000549354 RUBCNQ92622 972 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 ASCC2Q9H1I8 757 aaPredicted RBP11.87□□□□□ -0.51
LINC00661-204ENST00000549354 PDLIM7Q9NR12 457 aa11.87□□□□□ -0.51
LINC00661-204ENST00000549354 RGS16O15492 202 aaPredicted RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 SNRPFP62306 86 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 MYL7Q01449 175 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GNPTABQ3T906 1256 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ACCSLQ4AC99 568 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 DENND2CQ68D51 928 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 FAM228AQ86W67 206 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ARHGEF19Q8IW93 802 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 SLC17A8Q8NDX2 589 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 KCNN1Q92952 543 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 XPO6Q96QU8 1125 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 PLCD4Q9BRC7 762 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 MYH11P35749 1972 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GTPBP10A4D1E9 387 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 CLDN3O15551 220 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 SGPL1O95470 568 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 SLC25A27O95847 323 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 STXBP2Q15833 593 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 PHLDB3Q6NSJ2 640 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GPAT2Q6NUI2 795 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 C6orf89Q6UWU4 347 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 BICD1Q96G01 975 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 DDX23Q9BUQ8 820 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 INTS9Q9NV88 658 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 COG5Q9UP83 839 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ARID2Q68CP9 1835 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ANKRD63C9JTQ0 380 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GOLGA8SH3BPF8 625 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GOLGA8MH3BSY2 632 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 RASSF9O75901 435 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 NCKAP1LP55160 1127 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GTF2BQ00403 316 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 GADL1Q6ZQY3 521 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ANO5Q75V66 913 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 FASTKD5Q7L8L6 764 aaKnown RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 SLC47A2Q86VL8 602 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 CHMP6Q96FZ7 201 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 JPH1Q9HDC5 661 aaPredicted RBP11.86□□□□□ -0.51
LINC00661-204ENST00000549354 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 ALG6Q9Y672 507 aa11.86□□□□□ -0.51
LINC00661-204ENST00000549354 PI4K2BG5E9Z4 385 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 PSAPP07602 524 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 PMS2P54278 862 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 NAA25Q14CX7 972 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 ARMC9Q7Z3E5 817 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 CPA5Q8WXQ8 436 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 NTPCRQ9BSD7 190 aaKnown RBP11.85□□□□□ -0.51
LINC00661-204ENST00000549354 AGPAT3Q9NRZ7 376 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 TELO2Q9Y4R8 837 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 IGKV6D-21A0A0A0MT36 114 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 ZNF862O60290 1169 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 FMO5P49326 533 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 RTP1P59025 263 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 BIRC3Q13489 604 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 MOB2Q70IA6 237 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
LINC00661-204ENST00000549354 INTS2Q9H0H0 1204 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms