RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GOLGA8IPA6NC78 632 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ARL5CA6NH57 179 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 GOLGA8JA6NMD2 632 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 AFPP02771 609 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ACRP10323 421 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 DLATP10515 647 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ATP2A2P16615 1042 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ATF7P17544 494 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 RPL9P32969 192 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 PNPLA4P41247 253 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 CASP4P49662 377 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 OSTNP61366 133 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 CLDN10P78369 228 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 SLC10A6Q3KNW5 377 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 DCAF17Q5H9S7 520 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 FKBP15Q5T1M5 1219 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ALKAL1Q6UXT8 129 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 CEP120Q8N960 986 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 FAXDC2Q96IV6 333 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ZNF560Q96MR9 790 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 YME1L1Q96TA2 773 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 RAD9AQ99638 391 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 GDF15Q99988 308 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 TMEM175Q9BSA9 504 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 DNAI2Q9GZS0 605 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 TMEM8AQ9HCN3 771 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 FANCLQ9NW38 375 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 LIMA1Q9UHB6 759 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 USP20Q9Y2K6 914 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 CEP290O15078 2479 aa10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 LRRC10BA6NIK2 292 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 LACTBL1A8MY62 500 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 PES1O00541 588 aaKnown RBP10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 PHACTR2O75167 634 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 OFD1O75665 1012 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 DGKIO75912 1065 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 GJB5O95377 273 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 SERPINC1P01008 464 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 P4HA1P13674 534 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 ZNF18P17022 549 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 AKAP5P24588 427 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 ATICP31939 592 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 MLH1P40692 756 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 TNFSF9P41273 254 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 MXI1P50539 228 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 GSE1Q14687 1217 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 NCAPHQ15003 741 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 RASIP1Q5U651 963 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 KRT39Q6A163 491 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 LUZP1Q86V48 1076 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 CREBRFQ8IUR6 639 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 FMNL3Q8IVF7 1028 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 TAF4BQ92750 862 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 IQCDQ96DY2 449 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 GAD1Q99259 594 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 OSBPL7Q9BZF2 842 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 FAM124BQ9H5Z6 455 aaPredicted RBP10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 PDE11AQ9HCR9 933 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 INTS13Q9NVM9 706 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 HES2Q9Y543 173 aa10.56□□□□□ -0.72
SMARCD1-206ENST00000549274 SMIM28A0A1B0GU29 152 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 H0YGN5 161 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 TLL1O43897 1013 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 ZC3H11AO75152 810 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 LAG3P18627 525 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 TRIM21P19474 475 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 RFX1P22670 979 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 LRPAP1P30533 357 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 PPM1AP35813 382 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 RBP5P82980 135 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 HTRA4P83105 476 aaPredicted RBP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 KCNH2Q12809 1159 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 ELAVL2Q12926 359 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 MYO1EQ12965 1108 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 TUSC3Q13454 348 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 BIRC3Q13489 604 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 TRPC3Q13507 836 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 RAB30Q15771 203 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 VWA3BQ502W6 1294 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 C16orf59Q7L2K0 433 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 HERC6Q8IVU3 1022 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 CRIPAKQ8N1N5 446 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 LRRC52Q8N7C0 313 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 ANP32BQ92688 251 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 CCDC127Q96BQ5 260 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 VWCEQ96DN2 955 aa10.55□□□□□ -0.72
SMARCD1-206ENST00000549274 PPP1R10Q96QC0 940 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms