RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IFNAR2P48551 515 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 ZBED6P86452 979 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 TFDP1Q14186 410 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 GPNMBQ14956 572 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 FAM171BQ6P995 826 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 FBXO46Q6PJ61 603 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-212ENST00000549162 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 SKAP1Q86WV1 359 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 TMEM86AQ8N2M4 240 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 SLC35C1Q96A29 364 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 RUNDC3BQ96NL0 473 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 CITED4Q96RK1 184 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 NIF3L1Q9GZT8 377 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 UBA5Q9GZZ9 404 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 OBP2AQ9NY56 170 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 RRN3Q9NYV6 651 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 NOCTQ9UK39 431 aaKnown RBP5.33□□□□□ -1.56
SCAF11-212ENST00000549162 RIMKLBQ9ULI2 386 aa5.33□□□□□ -1.56
SCAF11-212ENST00000549162 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 GADD45BO75293 160 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TDP2O95551 362 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 HSPA8P11142 646 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 DRG2P55039 364 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 PAK1Q13153 545 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 BIRC2Q13490 618 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 CEP57L1Q8IYX8 460 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 IL31RAQ8NI17 732 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 PHKBQ93100 1093 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 COL26A1Q96A83 441 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 ALKBH8Q96BT7 664 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 RPGRIP1Q96KN7 1286 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 XPO4Q9C0E2 1151 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 XYLT2Q9H1B5 865 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TTC12Q9H892 705 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 PARVGQ9HBI0 331 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 CBX8Q9HC52 389 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 NEUROD4Q9HD90 331 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TRPV5Q9NQA5 729 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 LRWD1Q9UFC0 647 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 GGT7Q9UJ14 662 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TNFRSF10BO14763 440 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 IGLV3-27P01718 113 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 CFHP08603 1231 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 ARP10275 920 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 CPA1P15085 419 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 SMPD1P17405 629 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 RPL13P26373 211 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 YWHABP31946 246 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 DGKDQ16760 1214 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 INTS6LQ5JSJ4 861 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 GNASQ5JWF2 1037 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 CHRDL2Q6WN34 429 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 RNF165Q6ZSG1 346 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 POLNQ7Z5Q5 900 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 MICU3Q86XE3 530 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TRIM11Q96F44 468 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 SLC9A7Q96T83 725 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 STK33Q9BYT3 514 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 DNM3Q9UQ16 869 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 MINDY4BA8MYZ0 360 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TCP10L2B9ZVM9 353 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 ZBTB24O43167 697 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 ATMINO43313 823 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 LGALS2P05162 132 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 COPS2P61201 443 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 AMPD2Q01433 879 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 CYP24A1Q07973 514 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 KCNMA1Q12791 1236 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 C4orf46Q504U0 113 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 LRCH2Q5VUJ6 765 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 SNRNP48Q6IEG0 339 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 HS2ST1Q7LGA3 356 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 HCAR2Q8TDS4 363 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 HERVK_113Q902F9 699 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 HPS3Q969F9 1004 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 SMARCE1Q969G3 411 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 ZNF577Q9BSK1 485 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 TSGA10Q9BZW7 698 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 AGPAT3Q9NRZ7 376 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 FANCLQ9NW38 375 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 OSER1Q9NX31 292 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 SAP30BPQ9UHR5 308 aaKnown RBP5.32□□□□□ -1.56
SCAF11-212ENST00000549162 ADAMTS20P59510 1910 aa5.32□□□□□ -1.56
SCAF11-212ENST00000549162 UNGP13051 313 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 GLRA2P23416 452 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 CENPCQ03188 943 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 Q3C1V9 767 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 PUS10Q3MIT2 529 aaKnown RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 RRAGBQ5VZM2 374 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 RNF19BQ6ZMZ0 732 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MIGA2Q7L4E1 593 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 DYMQ7RTS9 669 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 TRAPPC11Q7Z392 1133 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 KCNK18Q7Z418 384 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 IRF2BP2Q7Z5L9 587 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 RBBP8NLQ8NC74 664 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-212ENST00000549162 TEKT4Q8WW24 435 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 MSANTD3Q96H12 275 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 NUDT12Q9BQG2 462 aa5.31□□□□□ -1.56
SCAF11-212ENST00000549162 GRPEL1Q9HAV7 217 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms