RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RNF168Q8IYW5 571 aaPredicted RBP17.22■□□□□ 0.35
DDX54-205ENST00000548786 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 CASP10Q92851 521 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 STK39Q9UEW8 545 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 IRAK3Q9Y616 596 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 TEX28O15482 410 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 LILRB3O75022 631 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 EFEMP2O95967 443 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 PIGRP01833 764 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 CLTAP09496 248 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 SPATA31D3P0C874 917 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.35
DDX54-205ENST00000548786 AFMP43652 599 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 DSG1Q02413 1049 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
DDX54-205ENST00000548786 USP41Q3LFD5 358 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 KIAA0319Q5VV43 1072 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 SPATA31D4Q6ZUB0 917 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 C3orf58Q8NDZ4 430 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 GLIS3Q8NEA6 775 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 FEZF2Q8TBJ5 459 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 CNTN3Q9P232 1028 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
DDX54-205ENST00000548786 A0A0B4J269 797 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 PODXLO00592 558 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 OGTO15294 1046 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 KCNE1P15382 129 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 BRCC3P46736 316 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 ACOT2P49753 483 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 ZP2Q05996 745 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 PPP2R3AQ06190 1150 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
DDX54-205ENST00000548786 UPP1Q16831 310 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 XKR4Q5GH76 650 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 TMEM184AQ6ZMB5 413 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
DDX54-205ENST00000548786 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 KIF12Q96FN5 646 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 TRIM9Q9C026 710 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 ST6GALNAC4Q9H4F1 302 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 CHST7Q9NS84 486 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 SLC38A7Q9NVC3 462 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 KBTBD4Q9NVX7 518 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 KCNH3Q9ULD8 1083 aa17.2■□□□□ 0.34
DDX54-205ENST00000548786 PLXNA3P51805 1871 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 FRMD3A2A2Y4 597 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 LACTBL1A8MY62 500 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 FAM189A1O60320 539 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 PPP1R37O75864 691 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 PRPF6O94906 941 aaKnown RBP17.19■□□□□ 0.34
DDX54-205ENST00000548786 ADH1AP07327 375 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 SCP2P22307 547 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 CLCN4P51793 760 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
DDX54-205ENST00000548786 TMC5Q6UXY8 1006 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 SYCP3Q8IZU3 236 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 GJD3Q8N144 294 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 POMGNT1Q8WZA1 660 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDX54-205ENST00000548786 KCNN1Q92952 543 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 UROC1Q96N76 676 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 S1PR5Q9H228 398 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 RPF1Q9H9Y2 349 aaKnown RBP17.19■□□□□ 0.34
DDX54-205ENST00000548786 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
DDX54-205ENST00000548786 PDCD11Q14690 1871 aaKnown RBP17.18■□□□□ 0.34
DDX54-205ENST00000548786 PFKFB1P16118 471 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 ABCD1P33897 745 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 AMPD3Q01432 767 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 PSMD5Q16401 504 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 DCLRE1AQ6PJP8 1040 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 CD300LGQ6UXG3 332 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 PPFIBP1Q86W92 1011 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 HVCN1Q96D96 273 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 SAAL1Q96ER3 474 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 STRA6Q9BX79 667 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 MAN1C1Q9NR34 630 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 TSHZ2Q9NRE2 1034 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 OLFML3Q9NRN5 406 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 AGO2Q9UKV8 859 aaKnown RBP17.18■□□□□ 0.34
DDX54-205ENST00000548786 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 PCDHB13Q9Y5F0 798 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms