RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ZFP42Q96MM3 310 aa5.46□□□□□ -1.54
APP-217ENST00000548570 CASD1Q96PB1 797 aa5.46□□□□□ -1.54
APP-217ENST00000548570 TMEM206Q9H813 350 aa5.46□□□□□ -1.54
APP-217ENST00000548570 CBX8Q9HC52 389 aa5.46□□□□□ -1.54
APP-217ENST00000548570 TOPORSQ9NS56 1045 aaPredicted RBP5.46□□□□□ -1.54
APP-217ENST00000548570 SAMSN1Q9NSI8 373 aaKnown RBP5.46□□□□□ -1.54
APP-217ENST00000548570 ANKFY1Q9P2R3 1169 aa5.46□□□□□ -1.54
APP-217ENST00000548570 NXF1Q9UBU9 619 aaKnown RBP5.46□□□□□ -1.54
APP-217ENST00000548570 KCNG1Q9UIX4 513 aa5.46□□□□□ -1.54
APP-217ENST00000548570 LAMA2P24043 3122 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 CHD9Q3L8U1 2897 aa5.45□□□□□ -1.54
APP-217ENST00000548570 ABHD14A-ACY1A0A1B0GW23 586 aa5.45□□□□□ -1.54
APP-217ENST00000548570 TTC26A0AVF1 554 aa5.45□□□□□ -1.54
APP-217ENST00000548570 LCHNA4D1U4 455 aa5.45□□□□□ -1.54
APP-217ENST00000548570 GRXCR1A8MXD5 290 aa5.45□□□□□ -1.54
APP-217ENST00000548570 LACTBL1A8MY62 500 aa5.45□□□□□ -1.54
APP-217ENST00000548570 F8W810 466 aa5.45□□□□□ -1.54
APP-217ENST00000548570 PPEF2O14830 753 aa5.45□□□□□ -1.54
APP-217ENST00000548570 OGTO15294 1046 aa5.45□□□□□ -1.54
APP-217ENST00000548570 CLDN3O15551 220 aa5.45□□□□□ -1.54
APP-217ENST00000548570 EXTL3O43909 919 aa5.45□□□□□ -1.54
APP-217ENST00000548570 OFD1O75665 1012 aa5.45□□□□□ -1.54
APP-217ENST00000548570 DGKIO75912 1065 aa5.45□□□□□ -1.54
APP-217ENST00000548570 RECQL4O94761 1208 aa5.45□□□□□ -1.54
APP-217ENST00000548570 ERLIN2O94905 339 aa5.45□□□□□ -1.54
APP-217ENST00000548570 LETM1O95202 739 aaPredicted RBP5.45□□□□□ -1.54
APP-217ENST00000548570 PARNO95453 639 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 FGBP02675 491 aa5.45□□□□□ -1.54
APP-217ENST00000548570 NFICP08651 508 aa5.45□□□□□ -1.54
APP-217ENST00000548570 CXCL8P10145 99 aa5.45□□□□□ -1.54
APP-217ENST00000548570 ATP1A3P13637 1013 aa5.45□□□□□ -1.54
APP-217ENST00000548570 MYOGP15173 224 aa5.45□□□□□ -1.54
APP-217ENST00000548570 NR2F2P24468 414 aa5.45□□□□□ -1.54
APP-217ENST00000548570 GCGRP47871 477 aa5.45□□□□□ -1.54
APP-217ENST00000548570 CYP2J2P51589 502 aa5.45□□□□□ -1.54
APP-217ENST00000548570 GUCY2FP51841 1108 aa5.45□□□□□ -1.54
APP-217ENST00000548570 CLDN10P78369 228 aa5.45□□□□□ -1.54
APP-217ENST00000548570 LRRC63Q05C16 580 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SOX4Q06945 474 aaPredicted RBP5.45□□□□□ -1.54
APP-217ENST00000548570 SPAG1Q07617 926 aa5.45□□□□□ -1.54
APP-217ENST00000548570 PPIGQ13427 754 aaKnown RBP eCLIP5.45□□□□□ -1.54
APP-217ENST00000548570 ADAM9Q13443 819 aa5.45□□□□□ -1.54
APP-217ENST00000548570 MYBPC2Q14324 1141 aa5.45□□□□□ -1.54
APP-217ENST00000548570 NOLC1Q14978 699 aaKnown RBP eCLIP5.45□□□□□ -1.54
APP-217ENST00000548570 SNRNP35Q16560 246 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 DCAF4L1Q3SXM0 396 aa5.45□□□□□ -1.54
APP-217ENST00000548570 ZNF568Q3ZCX4 644 aa5.45□□□□□ -1.54
APP-217ENST00000548570 HSP90AA4PQ58FG1 418 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SPATA1Q5VX52 437 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SMYD5Q6GMV2 418 aa5.45□□□□□ -1.54
APP-217ENST00000548570 TWF2Q6IBS0 349 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 SASS6Q6UVJ0 657 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SLC24A5Q71RS6 500 aa5.45□□□□□ -1.54
APP-217ENST00000548570 LUZP1Q86V48 1076 aa5.45□□□□□ -1.54
APP-217ENST00000548570 ZNF280BQ86YH2 543 aa5.45□□□□□ -1.54
APP-217ENST00000548570 BRSK2Q8IWQ3 736 aa5.45□□□□□ -1.54
APP-217ENST00000548570 EFCAB13Q8IY85 973 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SYCP3Q8IZU3 236 aa5.45□□□□□ -1.54
APP-217ENST00000548570 HELQQ8TDG4 1101 aa5.45□□□□□ -1.54
APP-217ENST00000548570 POMGNT1Q8WZA1 660 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SYAP1Q96A49 352 aaPredicted RBP5.45□□□□□ -1.54
APP-217ENST00000548570 C18orf25Q96B23 403 aaPredicted RBP5.45□□□□□ -1.54
APP-217ENST00000548570 ZNF689Q96CS4 500 aaPredicted RBP5.45□□□□□ -1.54
APP-217ENST00000548570 BICD1Q96G01 975 aa5.45□□□□□ -1.54
APP-217ENST00000548570 CCDC34Q96HJ3 373 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SNX27Q96L92 541 aa5.45□□□□□ -1.54
APP-217ENST00000548570 GAD1Q99259 594 aa5.45□□□□□ -1.54
APP-217ENST00000548570 POP1Q99575 1024 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 BPIFA3Q9BQP9 254 aa5.45□□□□□ -1.54
APP-217ENST00000548570 FAM213AQ9BRX8 229 aa5.45□□□□□ -1.54
APP-217ENST00000548570 MSTO1Q9BUK6 570 aa5.45□□□□□ -1.54
APP-217ENST00000548570 FTHL17Q9BXU8 183 aa5.45□□□□□ -1.54
APP-217ENST00000548570 RBSNQ9H1K0 784 aa5.45□□□□□ -1.54
APP-217ENST00000548570 ELAC1Q9H777 363 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 ANO10Q9NW15 660 aa5.45□□□□□ -1.54
APP-217ENST00000548570 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
APP-217ENST00000548570 KLK14Q9P0G3 267 aa5.45□□□□□ -1.54
APP-217ENST00000548570 CACNG4Q9UBN1 327 aa5.45□□□□□ -1.54
APP-217ENST00000548570 AGO2Q9UKV8 859 aaKnown RBP5.45□□□□□ -1.54
APP-217ENST00000548570 ARID2Q68CP9 1835 aa5.45□□□□□ -1.54
APP-217ENST00000548570 SIP14410 1827 aa5.44□□□□□ -1.54
APP-217ENST00000548570 SMIM28A0A1B0GU29 152 aa5.44□□□□□ -1.54
APP-217ENST00000548570 ARL5CA6NH57 179 aa5.44□□□□□ -1.54
APP-217ENST00000548570 LRRIQ3A6PVS8 624 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 J3QL48 77 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PSMA7O14818 248 aa5.44□□□□□ -1.54
APP-217ENST00000548570 IKBKBO14920 756 aa5.44□□□□□ -1.54
APP-217ENST00000548570 BAIAP3O94812 1187 aa5.44□□□□□ -1.54
APP-217ENST00000548570 DDHD2O94830 711 aa5.44□□□□□ -1.54
APP-217ENST00000548570 GJB5O95377 273 aa5.44□□□□□ -1.54
APP-217ENST00000548570 EOMESO95936 686 aa5.44□□□□□ -1.54
APP-217ENST00000548570 EFEMP2O95967 443 aa5.44□□□□□ -1.54
APP-217ENST00000548570 PFKMP08237 780 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CLTAP09496 248 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TRIM49P0CI25 452 aa5.44□□□□□ -1.54
APP-217ENST00000548570 TRIM49CP0CI26 452 aa5.44□□□□□ -1.54
APP-217ENST00000548570 CCDC192P0DO97 292 aa5.44□□□□□ -1.54
APP-217ENST00000548570 KCNE1P15382 129 aa5.44□□□□□ -1.54
APP-217ENST00000548570 ZSCAN20P17040 1043 aaPredicted RBP5.44□□□□□ -1.54
APP-217ENST00000548570 ABCD1P33897 745 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms