RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 CREMQ03060 361 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 TARDBPQ13148 414 aaKnown RBP eCLIP5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 ATAT1Q5SQI0 421 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 ATXN7L2Q5T6C5 722 aaPredicted RBP5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 FAM102BQ5T8I3 360 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 PLXDC1Q8IUK5 500 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 PALM2Q8IXS6 379 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 RAVER1Q8IY67 606 aaKnown RBP5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 FBXO18Q8NFZ0 1043 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 IFI44Q8TCB0 444 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 HPS3Q969F9 1004 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 TMX3Q96JJ7 454 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 CLPTM1LQ96KA5 538 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 MAP3K14Q99558 947 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 NDC1Q9BTX1 674 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 POGKQ9P215 609 aa5.41□□□□□ -1.54
DEPDC4-205ENST00000548313 DIRC3C9JPN6 131 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 WNT10BO00744 389 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 TSPAN6O43657 245 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 RECQL4O94761 1208 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 AMHP03971 560 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 HMGB1P09429 215 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 ALAS1P13196 640 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 PGS1Q32NB8 556 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 CRB2Q5IJ48 1285 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 IFIT1BQ5T764 474 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 NXNQ6DKJ4 435 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 GADL1Q6ZQY3 521 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 C1orf210Q8IVY1 113 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 TCEAL8Q8IYN2 117 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 C3orf20Q8ND61 904 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 NLGN4YQ8NFZ3 816 aaPredicted RBP5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 OR10H5Q8NGA6 315 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 KAT5Q92993 513 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 C1GALT1C1Q96EU7 318 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 MVB12AQ96EY5 273 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 DMRTA2Q96SC8 542 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 DCLRE1CQ96SD1 692 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 ZNF747Q9BV97 191 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 GTPBP4Q9BZE4 634 aaKnown RBP5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 C11orf54Q9H0W9 315 aaPredicted RBP5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 VPS11Q9H270 941 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 NMRK2Q9NPI5 230 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 KMT5AQ9NQR1 393 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 PARPBPQ9NWS1 579 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 SLC23A1Q9UHI7 598 aa5.4□□□□□ -1.54
DEPDC4-205ENST00000548313 PNPLA7Q6ZV29 1317 aa5.4□□□□□ -1.55
DEPDC4-205ENST00000548313 PLSCR1O15162 318 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 TRIM24O15164 1050 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 MTHFD1P11586 935 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 FXR1P51114 621 aaKnown RBP eCLIP5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 TLE1Q04724 770 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 UBXN2BQ14CS0 331 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 CSRP2Q16527 193 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 USP39Q53GS9 565 aaKnown RBP5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 SPDYAQ5MJ70 313 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 RNF207Q6ZRF8 634 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 TPH2Q8IWU9 490 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 IL17RDQ8NFM7 739 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 EXTL1Q92935 676 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 PCED1AQ9H1Q7 454 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 SLC12A5Q9H2X9 1139 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 KLHL42Q9P2K6 505 aa5.39□□□□□ -1.55
DEPDC4-205ENST00000548313 DRGXA6NNA5 263 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 AP1G1O43747 822 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 PEX11BO96011 259 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 LPOP22079 712 aaPredicted RBP5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 IL12RB1P42701 662 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 RAP2BP61225 183 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 NRN1LQ496H8 165 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 MINDY4Q4G0A6 757 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 PABPC1LQ4VXU2 614 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 RABL3Q5HYI8 236 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 ZNF529Q6P280 563 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 IL17DQ8TAD2 202 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 SLC35G2Q8TBE7 412 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 PGBD4Q96DM1 585 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 CLIP3Q96DZ5 547 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 FAM167AQ96KS9 214 aa5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 REXO4Q9GZR2 422 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 SIDT1Q9NXL6 827 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 RUVBL1Q9Y265 456 aaKnown RBP5.38□□□□□ -1.55
DEPDC4-205ENST00000548313 GOLGA6CA6NDK9 693 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 GOLGA6BA6NDN3 693 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 GRXCR1A8MXD5 290 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 GOLGA6DP0CG33 693 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 MALP21145 153 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 SMARCA1P28370 1054 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 HK3P52790 923 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 TOB2Q14106 344 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 LRRC41Q15345 812 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 KHDC1Q4VXA5 237 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 B3GNT9Q6UX72 402 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 EPM2AIP1Q7L775 607 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 SYT12Q8IV01 421 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 MAGEB6Q8N7X4 407 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 RNF169Q8NCN4 708 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms