RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 LIMD1Q9UGP4 676 aa13.66□□□□□ -0.22
GCN1-204ENST00000548132 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
GCN1-204ENST00000548132 SSX2IPQ9Y2D8 614 aa13.66□□□□□ -0.22
GCN1-204ENST00000548132 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
GCN1-204ENST00000548132 ZFHX2Q9C0A1 2572 aaPredicted RBP13.65□□□□□ -0.22
GCN1-204ENST00000548132 CCDC195A0A1B0GUA6 201 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 H3BQV1 296 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
GCN1-204ENST00000548132 NR1I2O75469 434 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 TADA2AO75478 443 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 ZMYND10O75800 440 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 KCNE1P15382 129 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 OSTNP61366 133 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 NOLC1Q14978 699 aaKnown RBP eCLIP13.65□□□□□ -0.221e-6■■■□□ 17
GCN1-204ENST00000548132 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.22
GCN1-204ENST00000548132 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
GCN1-204ENST00000548132 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 ZBTB41Q5SVQ8 909 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 ZBTB33Q86T24 672 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 UBALD2Q8IYN6 164 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 TMEM105Q8N8V8 129 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 NTPCRQ9BSD7 190 aaKnown RBP13.65□□□□□ -0.22
GCN1-204ENST00000548132 C17orf75Q9HAS0 396 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 ANKFY1Q9P2R3 1169 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 EPS15L1Q9UBC2 864 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 TUBGCP4Q9UGJ1 667 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 DUSP12Q9UNI6 340 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 GVINP1Q7Z2Y8 2422 aa13.65□□□□□ -0.22
GCN1-204ENST00000548132 DENND4CQ5VZ89 1909 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 TICRRQ7Z2Z1 1910 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 NRG2O14511 850 aaPredicted RBP13.64□□□□□ -0.23
GCN1-204ENST00000548132 HARSP12081 509 aaKnown RBP13.64□□□□□ -0.23
GCN1-204ENST00000548132 NTHL1P78549 312 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 CREMQ03060 361 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 POTEHQ6S545 545 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 BRAPQ7Z569 592 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 PLEKHA4Q9H4M7 779 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 KCNK12Q9HB15 430 aa13.64□□□□□ -0.23
GCN1-204ENST00000548132 PODXLO00592 558 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 TBC1D4O60343 1298 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 TOM1L1O75674 476 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 PIGRP01833 764 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 C8AP07357 584 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 POU2F2P09086 479 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 CXCL8P10145 99 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 HOXA9P31269 272 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 TNFSF9P41273 254 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 MCL1Q07820 350 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 HTR4Q13639 388 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 LARP1BQ659C4 914 aaKnown RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 ZPBP2Q6X784 338 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 GET4Q7L5D6 327 aaPredicted RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 GPBP1Q86WP2 473 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 SUGP1Q8IWZ8 645 aaKnown RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 KCTD17Q8N5Z5 321 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 AK8Q96MA6 479 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 UROC1Q96N76 676 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 KCND2Q9NZV8 630 aa13.63□□□□□ -0.23
GCN1-204ENST00000548132 FBXO2Q9UK22 296 aaPredicted RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 RBM19Q9Y4C8 960 aaKnown RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.63□□□□□ -0.23
GCN1-204ENST00000548132 WDR27A2RRH5 827 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
GCN1-204ENST00000548132 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 TISP43B9A030 160 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 SLC26A4O43511 780 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 B3GAT3O94766 335 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 NPR3P17342 541 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 AVPR2P30518 371 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 ROR1Q01973 937 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
GCN1-204ENST00000548132 RAB33AQ14088 237 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 MCM6Q14566 821 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 CEP57Q86XR8 500 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 ST13P5Q8NFI4 369 aaPredicted RBP13.62□□□□□ -0.23
GCN1-204ENST00000548132 SLC7A14Q8TBB6 771 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 RAD54LQ92698 747 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 IKZF4Q9H2S9 585 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 TOPORSQ9NS56 1045 aaPredicted RBP13.62□□□□□ -0.23
GCN1-204ENST00000548132 HCFC1R1Q9NWW0 138 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 ODF2LQ9ULJ1 636 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 CLIC4Q9Y696 253 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 FRYLO94915 3013 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 SPTBN4Q9H254 2564 aa13.62□□□□□ -0.23
GCN1-204ENST00000548132 A0A087X0B3 334 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms