RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 IL17REQ8NFR9 667 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 RTF1Q92541 710 aaKnown RBP5.42□□□□□ -1.54
CBX5-203ENST00000547872 MBD6Q96DN6 1003 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 AJUBAQ96IF1 538 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 ZDHHC5Q9C0B5 715 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 ZMAT4Q9H898 229 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 EMC7Q9NPA0 242 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 RTEL1Q9NZ71 1219 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 Q9UFV3 132 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 CDC42EP3Q9UKI2 254 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.42□□□□□ -1.54
CBX5-203ENST00000547872 APOBEC2Q9Y235 224 aaKnown RBP5.42□□□□□ -1.54
CBX5-203ENST00000547872 INVSQ9Y283 1065 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 PTPN22Q9Y2R2 807 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 COL4A1P02462 1669 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 RTL9Q8NET4 1388 aa5.42□□□□□ -1.54
CBX5-203ENST00000547872 A0A0G2JLL6 359 aaPredicted RBP5.41□□□□□ -1.54
CBX5-203ENST00000547872 MAFGO15525 162 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 TGM5O43548 720 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 ZEB2O60315 1214 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 B4GALT3O60512 393 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 B4GALT4O60513 344 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 DNAJC6O75061 913 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 BPIP17213 487 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 CSF2RBP32927 897 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 RRADP55042 308 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 PHC1P78364 1004 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 SMAD3P84022 425 aaKnown RBP5.41□□□□□ -1.54
CBX5-203ENST00000547872 DCTN1Q14203 1278 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 LRRC32Q14392 662 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 SURF1Q15526 300 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 TMEM200BQ69YZ2 307 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 CLEC4GQ6UXB4 293 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 DEFB123Q8N688 67 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 ERO1AQ96HE7 468 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 CRAMP1Q96RY5 1269 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 POFUT1Q9H488 388 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 PANK3Q9H999 370 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 SPC25Q9HBM1 224 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 MIS18AQ9NYP9 233 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 USP36Q9P275 1121 aaKnown RBP5.41□□□□□ -1.54
CBX5-203ENST00000547872 DUSP10Q9Y6W6 482 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 ZNF536O15090 1300 aa5.41□□□□□ -1.54
CBX5-203ENST00000547872 NEMP1O14524 444 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 BRINP1O60477 761 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ULK1O75385 1050 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 NTSR2O95665 410 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 VIL1P09327 827 aaKnown RBP5.4□□□□□ -1.54
CBX5-203ENST00000547872 SNRPA1P09661 255 aaKnown RBP5.4□□□□□ -1.54
CBX5-203ENST00000547872 ZNF888P0CJ79 500 aaPredicted RBP5.4□□□□□ -1.54
CBX5-203ENST00000547872 NF2P35240 595 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 MEOX1P50221 254 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 BCAR1P56945 870 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 NFKB2Q00653 900 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ADCY2Q08462 1091 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 CRHR2Q13324 411 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ZMAT1Q5H9K5 638 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ZFYVE27Q5T4F4 411 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 GPR158Q5T848 1215 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ARHGEF18Q6ZSZ5 1173 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 FILIP1Q7Z7B0 1213 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 STRA8Q7Z7C7 330 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 ZNF610Q8N9Z0 462 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 SLC5A5Q92911 643 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 FERMT2Q96AC1 680 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 THUMPD2Q9BTF0 503 aaKnown RBP5.4□□□□□ -1.54
CBX5-203ENST00000547872 MYL10Q9BUA6 226 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 MXD3Q9BW11 206 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 JADE2Q9NQC1 790 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 STAP2Q9UGK3 403 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 MSRAQ9UJ68 235 aa5.4□□□□□ -1.54
CBX5-203ENST00000547872 MAP3K15Q6ZN16 1313 aa5.4□□□□□ -1.55
CBX5-203ENST00000547872 LRRC37AA6NMS7 1700 aa5.4□□□□□ -1.55
CBX5-203ENST00000547872 MKI67P46013 3256 aaKnown RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 SCN9AQ15858 1988 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 LAMTOR5O43504 91 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 PRICKLE3O43900 615 aaPredicted RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 MAFO75444 373 aaPredicted RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 PRPF6O94906 941 aaKnown RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 ANXA1P04083 346 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 ID4P47928 161 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 TM4SF4P48230 202 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 GPSM2P81274 684 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 MYBPC3Q14896 1274 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 NOLC1Q14978 699 aaKnown RBP eCLIP5.39□□□□□ -1.55
CBX5-203ENST00000547872 EIF4HQ15056 248 aaKnown RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 TERF2Q15554 542 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 DGKDQ16760 1214 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 CC2D1BQ5T0F9 858 aaKnown RBP5.39□□□□□ -1.55
CBX5-203ENST00000547872 BROXQ5VW32 411 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 KIAA1841Q6NSI8 718 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 PPP1R42Q7Z4L9 355 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 AFAP1L2Q8N4X5 818 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 ZNF333Q96JL9 665 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 CLMNQ96JQ2 1002 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 C20orf173Q96LM9 149 aa5.39□□□□□ -1.55
CBX5-203ENST00000547872 MYOZ2Q9NPC6 264 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms