RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 EMILIN2Q9BXX0 1053 aa12.96□□□□□ -0.33
YBX3-217ENST00000546164 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
YBX3-217ENST00000546164 RXFP1Q9HBX9 757 aa12.96□□□□□ -0.33
YBX3-217ENST00000546164 KCNH3Q9ULD8 1083 aa12.96□□□□□ -0.33
YBX3-217ENST00000546164 BARX2Q9UMQ3 279 aaPredicted RBP12.96□□□□□ -0.33
YBX3-217ENST00000546164 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
YBX3-217ENST00000546164 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
YBX3-217ENST00000546164 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 MBTPS2O43462 519 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 TADA2AO75478 443 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 C1RP00736 705 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 CNPP09543 421 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 IL9P15248 144 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 POU5F1Q01860 360 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 SMAD2Q15796 467 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 UPP1Q16831 310 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 ANKRD54Q6NXT1 300 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 TAS1R1Q7RTX1 841 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 SLC22A17Q8WUG5 538 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 STAMQ92783 540 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
YBX3-217ENST00000546164 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 KLHL5Q96PQ7 755 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.95□□□□□ -0.34
YBX3-217ENST00000546164 CACNG4Q9UBN1 327 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 PRKAG3Q9UGI9 489 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 HPSEQ9Y251 543 aa12.95□□□□□ -0.34
YBX3-217ENST00000546164 A0A1W2PQ27 194 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 A0A1W2PQ64 194 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 A0A1W2PQD8 194 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 ANKRD63C9JTQ0 380 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 GCNT3O95395 438 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 CXCL8P10145 99 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
YBX3-217ENST00000546164 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
YBX3-217ENST00000546164 CLCNKBP51801 687 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 CASP5P51878 434 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
YBX3-217ENST00000546164 EHHADHQ08426 723 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 POSTNQ15063 836 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 ZBTB6Q15916 424 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
YBX3-217ENST00000546164 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 SYCE2Q6PIF2 218 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 CD302Q8IX05 232 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 TMEM87AQ8NBN3 555 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 RABGGTAQ92696 567 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 ACCSQ96QU6 501 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 DZANK1Q9NVP4 752 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 TBC1D7Q9P0N9 293 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
YBX3-217ENST00000546164 CPSF3Q9UKF6 684 aaKnown RBP12.94□□□□□ -0.34
YBX3-217ENST00000546164 C5orf42Q9H799 3197 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 TISP43B9A030 160 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 TEX28O15482 410 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 ACTN4O43707 911 aaKnown RBP12.93□□□□□ -0.34
YBX3-217ENST00000546164 B3GAT3O94766 335 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 ADH1AP07327 375 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 MYBP10242 640 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 PFKFB1P16118 471 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 CYP3A5P20815 502 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 ADSSP30520 456 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 CA8P35219 290 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 TNFSF9P41273 254 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 CLCN4P51793 760 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 ASIC1P78348 528 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 CREMQ03060 361 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 PPP2R3AQ06190 1150 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 KCNA1Q09470 495 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 CLUL1Q15846 466 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 ZBTB41Q5SVQ8 909 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 KIAA1841Q6NSI8 718 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 PDXDC1Q6P996 788 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 STXBP4Q6ZWJ1 553 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 UNC13DQ70J99 1090 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 PIK3R5Q8WYR1 880 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 SUSD6Q92537 303 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 NECAB3Q96P71 396 aaPredicted RBP12.93□□□□□ -0.34
YBX3-217ENST00000546164 TTPALQ9BTX7 342 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 FGFBP2Q9BYJ0 223 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 S1PR5Q9H228 398 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 TMEM206Q9H813 350 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
YBX3-217ENST00000546164 GOLGA2P5Q9HBQ8 144 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 FNIP2Q9P278 1114 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 CITO14578 2027 aa12.93□□□□□ -0.34
YBX3-217ENST00000546164 A0A1B0GVL5 298 aa12.92□□□□□ -0.34
YBX3-217ENST00000546164 PVALEFA0A1B0GWK0 134 aa12.92□□□□□ -0.34
YBX3-217ENST00000546164 TNFRSF10AO00220 468 aa12.92□□□□□ -0.34
YBX3-217ENST00000546164 PODXLO00592 558 aa12.92□□□□□ -0.34
YBX3-217ENST00000546164 C2CD2LO14523 706 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms