RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 TMC2Q8TDI7 906 aa20.1■□□□□ 0.81
CCDC189-212ENST00000546006 PARD3BQ8TEW8 1205 aa20.1■□□□□ 0.81
CCDC189-212ENST00000546006 CCDC127Q96BQ5 260 aa20.1■□□□□ 0.81
CCDC189-212ENST00000546006 FNBP1Q96RU3 617 aa20.1■□□□□ 0.81
CCDC189-212ENST00000546006 METTL14Q9HCE5 456 aaKnown RBP20.1■□□□□ 0.81
CCDC189-212ENST00000546006 C2CD2Q9Y426 696 aa20.1■□□□□ 0.81
CCDC189-212ENST00000546006 PCDHA11Q9Y5I1 949 aa20.1■□□□□ 0.81
CCDC189-212ENST00000546006 IKBKBO14920 756 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 DLATP10515 647 aaKnown RBP20.09■□□□□ 0.81
CCDC189-212ENST00000546006 VAMP7P51809 220 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 MCCD1P59942 119 aaPredicted RBP20.09■□□□□ 0.81
CCDC189-212ENST00000546006 BFSP1Q12934 665 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 NCAPHQ15003 741 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 NAB2Q15742 525 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 ZBTB6Q15916 424 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 CCDC40Q4G0X9 1142 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 USP37Q86T82 979 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 NT5DC4Q86YG4 428 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 IRF2BP1Q8IU81 584 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 DHX40Q8IX18 779 aaKnown RBP20.09■□□□□ 0.81
CCDC189-212ENST00000546006 EFCAB13Q8IY85 973 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 CGRRF1Q99675 332 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 SLC38A7Q9NVC3 462 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 ARMCX3Q9UH62 379 aaPredicted RBP20.09■□□□□ 0.81
CCDC189-212ENST00000546006 TRIP11Q15643 1979 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 ANK1P16157 1881 aa20.09■□□□□ 0.81
CCDC189-212ENST00000546006 LRRIQ3A6PVS8 624 aaPredicted RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 SMTNL1A8MU46 457 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 MARSP56192 900 aaKnown RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 IQCB1Q15051 598 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 ZNF280BQ86YH2 543 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 WDR49Q8IV35 697 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 FAM114A1Q8IWE2 563 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 FIBCD1Q8N539 461 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 CNOT6LQ96LI5 555 aaKnown RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 FAM193BQ96PV7 902 aaPredicted RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 CWH43Q9H720 699 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 NRDE2Q9H7Z3 1164 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 CBX8Q9HC52 389 aa20.08■□□□□ 0.81
CCDC189-212ENST00000546006 SAMSN1Q9NSI8 373 aaKnown RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 UBQLN1Q9UMX0 589 aaKnown RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.08■□□□□ 0.81
CCDC189-212ENST00000546006 LCHNA4D1U4 455 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 XPOTO43592 962 aaKnown RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 DDHD2O94830 711 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 MYOGP15173 224 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 DLG4P78352 724 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 CLDN10P78369 228 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 TFAMQ00059 246 aaKnown RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 DSC1Q08554 894 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 TUSC3Q13454 348 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 FAM200AQ8TCP9 573 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 C18orf25Q96B23 403 aaPredicted RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 POP1Q99575 1024 aaKnown RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 PBX4Q9BYU1 374 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 FANCLQ9NW38 375 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 HCSTQ9UBK5 93 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 PTPRJQ12913 1337 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 TRIOBPQ9H2D6 2365 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 BECN2A8MW95 431 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 TNNI1P19237 187 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 CYP3A5P20815 502 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 PBX2P40425 430 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 SOX4Q06945 474 aaPredicted RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 RAB30Q15771 203 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 DUOXA2Q1HG44 320 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 C1orf220Q5T0J3 134 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 LMBRD2Q68DH5 695 aaPredicted RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 COLGALT2Q8IYK4 626 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 BEST2Q8NFU1 509 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 CACTINQ8WUQ7 758 aaKnown RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 INTS13Q9NVM9 706 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 MAGEC2Q9UBF1 373 aaPredicted RBP20.07■□□□□ 0.8
CCDC189-212ENST00000546006 TUBGCP4Q9UGJ1 667 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 MSRAQ9UJ68 235 aa20.07■□□□□ 0.8
CCDC189-212ENST00000546006 PDCD11Q14690 1871 aaKnown RBP20.06■□□□□ 0.8
CCDC189-212ENST00000546006 TDRD15B5MCY1 1934 aaKnown RBP20.06■□□□□ 0.8
CCDC189-212ENST00000546006 B4GALT3O60512 393 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 TMEM191BP0C7N4 346 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 TRIM49P0CI25 452 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 TRIM49CP0CI26 452 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 SMAD3P84022 425 aaKnown RBP20.06■□□□□ 0.8
CCDC189-212ENST00000546006 LRIT3Q3SXY7 679 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 HSP90AA4PQ58FG1 418 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 DCAF17Q5H9S7 520 aaPredicted RBP20.06■□□□□ 0.8
CCDC189-212ENST00000546006 SPOUT1Q5T280 376 aaKnown RBP20.06■□□□□ 0.8
CCDC189-212ENST00000546006 CDKAL1Q5VV42 579 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 TRIM59Q8IWR1 403 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 OR5B17Q8NGF7 314 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 ANKRD36BP1Q96IX9 119 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 MTMR12Q9C0I1 747 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 DNAJB4Q9UDY4 337 aa20.06■□□□□ 0.8
CCDC189-212ENST00000546006 YBX2Q9Y2T7 364 aaKnown RBP20.06■□□□□ 0.8
CCDC189-212ENST00000546006 LINC01553A4QN01 128 aa20.05■□□□□ 0.8
CCDC189-212ENST00000546006 ZC3H11AO75152 810 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCDC189-212ENST00000546006 TNNC2P02585 160 aa20.05■□□□□ 0.8
CCDC189-212ENST00000546006 CA3P07451 260 aa20.05■□□□□ 0.8
CCDC189-212ENST00000546006 AP3M2P53677 418 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms