RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 DEFB129Q9H1M3 183 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 CENPHQ9H3R5 247 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 CXorf56Q9H5V9 222 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 LRRC19Q9H756 370 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 UBN1Q9NPG3 1134 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 INTS9Q9NV88 658 aaKnown RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 HAUS2Q9NVX0 235 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PI4KBQ9UBF8 816 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 CCNL1Q9UK58 526 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 DNAJC12Q9UKB3 198 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 VAV3Q9UKW4 847 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PNMA2Q9UL42 364 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PACSIN2Q9UNF0 486 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 SPATA31A6Q5VVP1 1343 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 FOCADQ5VW36 1801 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 BAZ2BQ9UIF8 2168 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 GREB1LQ9C091 1923 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 KAT6BQ8WYB5 2073 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ANKRD65E5RJM6 399 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 RASGRF2O14827 1237 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 LIN7AO14910 233 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 TGFB1I1O43294 461 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 HNRNPCL1O60812 293 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ZC3H11AO75152 810 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 SUN1O94901 812 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 LYPLA2O95372 231 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 IL2RAP01589 272 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 CYP1A2P05177 515 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 MYBL1P10243 752 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ACTN1P12814 892 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 CALRP27797 417 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 SLC1A1P43005 524 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PTGIRP43119 386 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PLCB3Q01970 1234 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 BFSP1Q12934 665 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PTP4A2Q12974 167 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 CALCOCO2Q13137 446 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PABPC4Q13310 644 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF268Q14587 947 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 RASA3Q14644 834 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 NFIXQ14938 502 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 GRIK5Q16478 980 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PRR16Q569H4 304 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 SYDE2Q5VT97 1194 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 TTC19Q6DKK2 380 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PRR5LQ6MZQ0 368 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 TATDN1Q6P1N9 297 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PPP1R21Q6ZMI0 780 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF677Q86XU0 584 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC63Q8NA47 563 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 OLIG1Q8TAK6 271 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 LNX1Q8TBB1 728 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 KIFAP3Q92845 792 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 SLC5A5Q92911 643 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ART4Q93070 314 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 RSRC1Q96IZ7 334 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ZDHHC15Q96MV8 337 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 RIT2Q99578 217 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC77Q9BR77 488 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 AP1M1Q9BXS5 423 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 NEUROG2Q9H2A3 272 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 BHMT2Q9H2M3 363 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 CPVLQ9H3G5 476 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ZHX3Q9H4I2 956 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 VEZTQ9HBM0 779 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 AGPAT3Q9NRZ7 376 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 DONSONQ9NYP3 566 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 TBC1D7Q9P0N9 293 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 SENP1Q9P0U3 644 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 BCCIPQ9P287 314 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 LARSQ9P2J5 1176 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 SRP68Q9UHB9 627 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 DBR1Q9UK59 544 aaKnown RBP6.93□□□□□ -1.3
SNHG1-225ENST00000545920 GTF3C4Q9UKN8 822 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 ATP8A1Q9Y2Q0 1164 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 PCDHA3Q9Y5H8 950 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 AFF2P51816 1311 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 LRRC37AA6NMS7 1700 aa6.93□□□□□ -1.3
SNHG1-225ENST00000545920 E7ENQ6 273 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 FSCN2O14926 492 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MSH4O15457 936 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 KCNQ2O43526 872 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 PSMD10O75832 226 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 LUC7L3O95232 432 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ECEL1O95672 775 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 GAS8O95995 478 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 OAS1P00973 400 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 NR3C2P08235 984 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ABHD2P08910 425 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ITGA4P13612 1032 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ALADP13716 330 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CHN1P15882 459 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ELF1P32519 619 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF76P36508 570 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 COILP38432 576 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 VEGFBP49765 207 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 PEX5P50542 639 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 DNA2P51530 1060 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CASP5P51878 434 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms