RNA–Protein interactions for RNA: ENST00000545901.5

HMBS-223, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-223	ENST00000545901	FRMD5	Q7Z6J6	570 aa		18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	RDH13	Q8NBN7	331 aa		18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	PARD3B	Q8TEW8	1205 aa		18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	SRRT	Q9BXP5	876 aa	Known RBP	18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	GZF1	Q9H116	711 aa	Predicted RBP	18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	TBC1D13	Q9NVG8	400 aa		18.9	■□□□□ 0.62
HMBS-223	ENST00000545901	PRUNE2	Q8WUY3	3088 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	XPOT	O43592	962 aa	Known RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	GATM	P50440	423 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	AFF1	P51825	1210 aa	Known RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	AP3M2	P53677	418 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	SMAD3	P84022	425 aa	Known RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	DSC1	Q08554	894 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	NAB2	Q15742	525 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	RAB30	Q15771	203 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	TPD52L1	Q16890	204 aa	Predicted RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	FAM117B	Q6P1L5	589 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	WDR49	Q8IV35	697 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	FAM114A1	Q8IWE2	563 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	ZMAT2	Q96NC0	199 aa	Known RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	MIOS	Q9NXC5	875 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	UBQLN1	Q9UMX0	589 aa	Known RBP	18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	INPP5F	Q9Y2H2	1132 aa		18.89	■□□□□ 0.61
HMBS-223	ENST00000545901	SMTNL1	A8MU46	457 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	KRT13	P13646	458 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	BFSP1	Q12934	665 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	BTG3	Q14201	252 aa	Predicted RBP	18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	TMEM132D	Q14C87	1099 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	FAM109B	Q6ICB4	259 aa	Predicted RBP	18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	FNBP1	Q96RU3	617 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	CGRRF1	Q99675	332 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	PDE11A	Q9HCR9	933 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	NFE2L3	Q9Y4A8	694 aa		18.88	■□□□□ 0.61
HMBS-223	ENST00000545901	POMC	P01189	267 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	VAMP7	P51809	220 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	WNT7B	P56706	349 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	TUSC3	Q13454	348 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	NCAPH	Q15003	741 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	JADE1	Q6IE81	842 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	IRF2BP1	Q8IU81	584 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	EFCAB13	Q8IY85	973 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	FAM200A	Q8TCP9	573 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	CACTIN	Q8WUQ7	758 aa	Known RBP	18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	CLP1	Q92989	425 aa	Known RBP	18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	FAM212A	Q96EL1	285 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	KIF12	Q96FN5	646 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	EEF2KMT	Q96G04	330 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	UROC1	Q96N76	676 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	TMEM175	Q9BSA9	504 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	CXCL16	Q9H2A7	254 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	TSPY26P	Q9H489	355 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	INTS13	Q9NVM9	706 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	PLAGL2	Q9UPG8	496 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	CDH23	Q9H251	3354 aa		18.87	■□□□□ 0.61
HMBS-223	ENST00000545901	MUC3A	Q02505	3323 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	GRXCR1	A8MXD5	290 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	NFIC	P08651	508 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	PRKCSH	P14314	528 aa	Predicted RBP	18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	LRPAP1	P30533	357 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	GTF2H1	P32780	548 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	RNASEL	Q05823	741 aa	Known RBP	18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	IQCB1	Q15051	598 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	DUOXA2	Q1HG44	320 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	CCDC40	Q4G0X9	1142 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	GLRA4	Q5JXX5	417 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	CDKAL1	Q5VV42	579 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	DHX40	Q8IX18	779 aa	Known RBP	18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	COLGALT2	Q8IYK4	626 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	FIBCD1	Q8N539	461 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	BEST2	Q8NFU1	509 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	PLEKHO2	Q8TD55	490 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	CCDC127	Q96BQ5	260 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	FAM193B	Q96PV7	902 aa	Predicted RBP	18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	PBX4	Q9BYU1	374 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	CWH43	Q9H720	699 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	MSRA	Q9UJ68	235 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	RWDD3	Q9Y3V2	267 aa		18.86	■□□□□ 0.61
HMBS-223	ENST00000545901	LRRIQ3	A6PVS8	624 aa	Predicted RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	STX10	O60499	249 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	LINC00271	P0C7V0	271 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	DLAT	P10515	647 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	LAG3	P18627	525 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	EEF1G	P26641	437 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	RPL9	P32969	192 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	RABGGTB	P53611	331 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	PAN2	Q504Q3	1202 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	C1orf220	Q5T0J3	134 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	TRIM59	Q8IWR1	403 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	AOPEP	Q8N6M6	819 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	DDX27	Q96GQ7	796 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	ANKRD36BP1	Q96IX9	119 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	CNOT6L	Q96LI5	555 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	NRDE2	Q9H7Z3	1164 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	CBX8	Q9HC52	389 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	AAAS	Q9NRG9	546 aa		18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	MRPL42	Q9Y6G3	142 aa	Known RBP	18.85	■□□□□ 0.61
HMBS-223	ENST00000545901	BECN2	A8MW95	431 aa		18.84	■□□□□ 0.61
HMBS-223	ENST00000545901	PMM2	O15305	246 aa		18.84	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms