RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NEU2Q9Y3R4 380 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 FAM47DPA6NHR8 397 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 E7ENQ6 273 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 LYPLA2O95372 231 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 GDF11O95390 407 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 GH1P01241 217 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 TAC1P20366 129 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 MAPK4P31152 587 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 NCKAP1LP55160 1127 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.92
TDP1-204ENST00000545686 MPP2Q14168 576 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 KYNUQ16719 465 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 BZW1Q7L1Q6 419 aaKnown RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 NIPA1Q7RTP0 329 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 USP37Q86T82 979 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 TDRPQ86YL5 185 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 CPNE8Q86YQ8 564 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
TDP1-204ENST00000545686 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ZNF570Q96NI8 536 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 LRMDAQ9H2I8 198 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 PPCSQ9HAB8 311 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 CHST7Q9NS84 486 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ADAM22Q9P0K1 906 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 CHORDC1Q9UHD1 332 aaPredicted RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 ANAPC7Q9UJX3 599 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 EXOC7Q9UPT5 735 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 PRPF4O43172 522 aaKnown RBP eCLIP9.32□□□□□ -0.92
TDP1-204ENST00000545686 PSTPIP1O43586 416 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 DIAPH2O60879 1101 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ENTPD3O75355 529 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ADRB2P07550 413 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ARP10275 920 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 POLGP54098 1239 aaPredicted RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 YARSP54577 528 aaKnown RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 MGAT5Q09328 741 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 KLF1Q13351 362 aaPredicted RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 TNIP1Q15025 636 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ZKSCAN8Q15776 578 aaPredicted RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 CCNG2Q16589 344 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 SLC30A10Q6XR72 485 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 MIER3Q7Z3K6 550 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 HAUS6Q7Z4H7 955 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ZNF677Q86XU0 584 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ECHDC2Q86YB7 292 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 GDAP1Q8TB36 358 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 INPP5DQ92835 1189 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 THOC1Q96FV9 657 aaKnown RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 TTC25Q96NG3 672 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 TMEM237Q96Q45 408 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 MXRA8Q9BRK3 442 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 ARHGEF10LQ9HCE6 1279 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 SENP1Q9P0U3 644 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 GGT7Q9UJ14 662 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 RPL26L1Q9UNX3 145 aaKnown RBP9.32□□□□□ -0.92
TDP1-204ENST00000545686 NAALADL1Q9UQQ1 740 aa9.32□□□□□ -0.92
TDP1-204ENST00000545686 FAM170AA1A519 330 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 TISP43B9A030 160 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 G3V3G9 751 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 PLA2G6O60733 806 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ZC3H11AO75152 810 aaKnown RBP eCLIP9.31□□□□□ -0.92
TDP1-204ENST00000545686 GH2P01242 217 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ADCY8P40145 1251 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 RARRES1P49788 294 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 GCNT1Q02742 428 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 SNX1Q13596 522 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 SNRNP35Q16560 246 aaKnown RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 CMPK2Q5EBM0 449 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 DCAF8Q5TAQ9 597 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 NSMFQ6X4W1 530 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 SRRM1Q8IYB3 904 aaKnown RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 KIF2BQ8N4N8 673 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ZCCHC9Q8N567 271 aaKnown RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 FBXL13Q8NEE6 735 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 CFAP61Q8NHU2 1237 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 PRCCQ92733 491 aaPredicted RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 SEMA4DQ92854 862 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 CFAP57Q96MR6 1250 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 PITPNM3Q9BZ71 974 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 LRRC4BQ9NT99 713 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 USH1CQ9Y6N9 552 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 MROH7Q68CQ1 1323 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 A0A1W2PRG0 241 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 NDC80O14777 642 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 DCTN3O75935 186 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 UNGP13051 313 aaPredicted RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 PAX7P23759 505 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 CACNB3P54284 484 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms