RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZMAT2Q96NC0 199 aaKnown RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 ACCSQ96QU6 501 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 POP1Q99575 1024 aaKnown RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 TRIM9Q9C026 710 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 HAPLN2Q9GZV7 340 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 SCAND2PQ9GZW5 306 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 DZANK1Q9NVP4 752 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 DPP7Q9UHL4 492 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 KCNH3Q9ULD8 1083 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 SPTBN5Q9NRC6 3674 aaKnown RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 VCANP13611 3396 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 TMEM189-UBE2V1I3L0A0 370 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 PPP1R37O75864 691 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 CXCL8P10145 99 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-216ENST00000544996 RPL9P32969 192 aaKnown RBP17.14■□□□□ 0.33
CCDC78-216ENST00000544996 POSTNQ15063 836 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 UPP1Q16831 310 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 ADALQ6DHV7 355 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 CES5AQ6NT32 575 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 ADHFE1Q8IWW8 467 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 SYCP3Q8IZU3 236 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 GJD3Q8N144 294 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 SLC22A17Q8WUG5 538 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 RIN2Q8WYP3 895 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-216ENST00000544996 TSPAN18Q96SJ8 248 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 TTPALQ9BTX7 342 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
CCDC78-216ENST00000544996 USP15Q9Y4E8 981 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-216ENST00000544996 MYH15Q9Y2K3 1946 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 TEX28O15482 410 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 EPCAMP16422 314 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 CMA1P23946 247 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 ASIC1P78348 528 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 NUCB2P80303 420 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 ITIH3Q06033 890 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
CCDC78-216ENST00000544996 SLC39A4Q6P5W5 647 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 SYCE2Q6PIF2 218 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 CEP57Q86XR8 500 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 CEP57L1Q8IYX8 460 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 POMGNT1Q8WZA1 660 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 FBXL18Q96ME1 805 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 STRA6Q9BX79 667 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 S1PR5Q9H228 398 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 GOLGA2P5Q9HBQ8 144 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 STYXL1Q9Y6J8 313 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 TDRD15B5MCY1 1934 aaKnown RBP17.13■□□□□ 0.33
CCDC78-216ENST00000544996 MYH11P35749 1972 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 BRWD1Q9NSI6 2320 aa17.13■□□□□ 0.33
CCDC78-216ENST00000544996 TTC26A0AVF1 554 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 ANKRD63C9JTQ0 380 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 PODXLO00592 558 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
CCDC78-216ENST00000544996 TNFSF9P41273 254 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 CLCN4P51793 760 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 ZP2Q05996 745 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 SOX4Q06945 474 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-216ENST00000544996 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-216ENST00000544996 CD302Q8IX05 232 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 C18orf25Q96B23 403 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-216ENST00000544996 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 C7orf25Q9BPX7 421 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 ADAM7Q9H2U9 754 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 CPSF3Q9UKF6 684 aaKnown RBP17.12■□□□□ 0.33
CCDC78-216ENST00000544996 AGO2Q9UKV8 859 aaKnown RBP17.12■□□□□ 0.33
CCDC78-216ENST00000544996 NUB1Q9Y5A7 615 aa17.12■□□□□ 0.33
CCDC78-216ENST00000544996 LACTBL1A8MY62 500 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
CCDC78-216ENST00000544996 FAM189A1O60320 539 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 GLUD1P00367 558 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 C1RP00736 705 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 MYBP10242 640 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 CASP5P51878 434 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 KCNA1Q09470 495 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
CCDC78-216ENST00000544996 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
CCDC78-216ENST00000544996 RTP2Q5QGT7 225 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 PIK3R5Q8WYR1 880 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 SUSD6Q92537 303 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 CHAMP1Q96JM3 812 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 RIPOR3Q96MK2 946 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 NECTIN4Q96NY8 510 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
CCDC78-216ENST00000544996 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
CCDC78-216ENST00000544996 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
CCDC78-216ENST00000544996 TISP43B9A030 160 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 SLFN14P0C7P3 912 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 PFKFB1P16118 471 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms