RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SLC44A3Q8N4M1 653 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 C12orf76Q8N812 135 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 SEPT1Q8WYJ6 367 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM169Q96HH4 297 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CDHR1Q96JP9 859 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 BTBD6Q96KE9 485 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 INPP4AQ96PE3 977 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ADAM2Q99965 735 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 TRIM56Q9BRZ2 755 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 EMILIN2Q9BXX0 1053 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 MRPL9Q9BYD2 267 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RHOBTB2Q9BYZ6 727 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CELF4Q9BZC1 486 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 FAM49AQ9H0Q0 323 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 TMX1Q9H3N1 280 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 SMARCAD1Q9H4L7 1026 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 SLC2A4RGQ9NR83 387 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 EPS15L1Q9UBC2 864 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 PCDHGB7Q9Y5F8 929 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 IRAK3Q9Y616 596 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ATG2AQ2TAZ0 1938 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CACNA1HO95180 2353 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 TRIP12Q14669 1992 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 SMIM35A0A1B0GVV1 85 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 SHISA8B8ZZ34 492 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 C9IYK1 514 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 M0R082 166 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 B3GALT4O96024 378 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CELA3AP09093 270 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 GOLGA8HP0CJ92 632 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 ARP10275 920 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CTSAP10619 480 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 FGFR1P11362 822 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 ESRRAP11474 423 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 EPHA1P21709 976 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 MARK3P27448 753 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 TCF7P36402 384 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 AFF1P51825 1210 aaKnown RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 POLGP54098 1239 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 IGBP1P78318 339 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 FAM189BP81408 668 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 PFKPQ01813 784 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 PWP1Q13610 501 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CSRP2Q16527 193 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 MARCH8Q5T0T0 291 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 UNQ6494/PRO21346Q6UXR6 183 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 PRR23CQ6ZRP0 262 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 DGKHQ86XP1 1220 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 RELL1Q8IUW5 271 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 VPS52Q8N1B4 723 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 SLC39A11Q8N1S5 342 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CELF5Q8N6W0 485 aaKnown RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CMASQ8NFW8 434 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF417Q8TAU3 575 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 SLC22A17Q8WUG5 538 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 NELL1Q92832 810 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CASD1Q96PB1 797 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF587Q96SQ5 575 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 NELL2Q99435 816 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 IER2Q9BTL4 223 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 LRRCC1Q9C099 1032 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 UBA5Q9GZZ9 404 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 ZBP1Q9H171 429 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 ACBD3Q9H3P7 528 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CHMP4BQ9H444 224 aaKnown RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 RNF41Q9H4P4 317 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CCSER2Q9H7U1 834 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 KAT14Q9H8E8 782 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 JPH1Q9HDC5 661 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 WDR6Q9NNW5 1121 aaKnown RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 SEMA4GQ9NTN9 838 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 KBTBD4Q9NVX7 518 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 SUPT16HQ9Y5B9 1047 aaKnown RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 PCDHA2Q9Y5H9 948 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.67□□□□□ -1.66
SNHG1-220ENST00000544550 CLUHO75153 1309 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 FAM186AA6NE01 2351 aa4.67□□□□□ -1.66
SNHG1-220ENST00000544550 H3BRJ5 948 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 MGEA5O60502 916 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PAGE1O75459 146 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PARP1P09874 1014 aaKnown RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 INSRRP14616 1297 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 GLULP15104 373 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 EPCAMP16422 314 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 ZSCAN20P17040 1043 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 RPS9P46781 194 aaKnown RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 LIG3P49916 1009 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 LIMK1P53667 647 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 RPS26P62854 115 aaKnown RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 SP4Q02446 784 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PPP2R3AQ06190 1150 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM62Q0P6H9 643 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 UBXN2BQ14CS0 331 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 MLF2Q15773 248 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 N4BP2L1Q5TBK1 243 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 LRSAM1Q6UWE0 723 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 DDX53Q86TM3 631 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms