RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 IL18RAPO95256 599 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 AFPP02771 609 aaKnown RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 CTSHP09668 335 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 IQCF3P0C7M6 154 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 KCNJ6P48051 423 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 CASP4P49662 377 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 RAB27AP51159 221 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 VAMP7P51809 220 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 MCCD1P59942 119 aaPredicted RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 UBXN1Q04323 297 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 CYP24A1Q07973 514 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 PSMD6Q15008 389 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 FBXO47Q5MNV8 452 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 ZNF618Q5T7W0 954 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 TCERG1LQ5VWI1 586 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 LRRC8DQ7L1W4 858 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 EEF2KMTQ96G04 330 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 BORCS6Q96GS4 357 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 FNBP1Q96RU3 617 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 TSPAN18Q96SJ8 248 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 FTHL17Q9BXU8 183 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 CDT1Q9H211 546 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 PDZD7Q9H5P4 517 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 TOPORSQ9NS56 1045 aaPredicted RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 RBAKQ9NYW8 714 aaPredicted RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 PRKAG3Q9UGI9 489 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 ST3GAL5Q9UNP4 418 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 PIN4Q9Y237 131 aaKnown RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 FAM50BQ9Y247 325 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 NOC2LQ9Y3T9 749 aaKnown RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 DMDP11532 3685 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 LCHNA4D1U4 455 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 TISP43B9A030 160 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 ABLIM1O14639 778 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 PMM2O15305 246 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 TPM1P09493 284 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 HARSP12081 509 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 HOXA11P31270 313 aaPredicted RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 GRM5P41594 1212 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 YARSP54577 528 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 ERVK-21P61565 698 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 KCNH2Q12809 1159 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 TRIM14Q14142 442 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 NR1I3Q14994 352 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 DCAF17Q5H9S7 520 aaPredicted RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 EEF1DP3Q658K8 133 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 TWF2Q6IBS0 349 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 APTXQ7Z2E3 356 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 ZBTB33Q86T24 672 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 FAM228AQ86W67 206 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 NT5DC4Q86YG4 428 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 CBWD2Q8IUF1 395 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 BRSK2Q8IWQ3 736 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 DRC7Q8IY82 874 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 TMEM40Q8WWA1 233 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 APBB2Q92870 758 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 WNT8BQ93098 351 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 SAAL1Q96ER3 474 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 ZBTB45Q96K62 511 aaPredicted RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 TGS1Q96RS0 853 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 NUP58Q9BVL2 599 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 TRAIPQ9BWF2 469 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 IKZF4Q9H2S9 585 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 ASB7Q9H672 318 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 RPF1Q9H9Y2 349 aaKnown RBP10.31□□□□□ -0.76
YBX3-215ENST00000544504 PLEKHA5Q9HAU0 1116 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 ERVK-5Q9HDB9 667 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 IMPACTQ9P2X3 320 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 DAAM1Q9Y4D1 1078 aa10.31□□□□□ -0.76
YBX3-215ENST00000544504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■□□□□ 9.3
YBX3-215ENST00000544504 GOLGA8IPA6NC78 632 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 GOLGA8JA6NMD2 632 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 CSDE1O75534 798 aaKnown RBP10.3□□□□□ -0.76
YBX3-215ENST00000544504 EDN1P05305 212 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 STAG3L1P0CL83 205 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 GHRP10912 638 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 ACOT2P49753 483 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 PTPN5P54829 565 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 WDR5P61964 334 aaKnown RBP10.3□□□□□ -0.76
YBX3-215ENST00000544504 ZP2Q05996 745 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 LPIN1Q14693 890 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 MIIPQ5JXC2 388 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 GBP6Q6ZN66 633 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 THNSL1Q8IYQ7 743 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 PARD3BQ8TEW8 1205 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 CACTINQ8WUQ7 758 aaKnown RBP10.3□□□□□ -0.76
YBX3-215ENST00000544504 SLC35C1Q96A29 364 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 CPB2Q96IY4 423 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 NAP1L5Q96NT1 182 aaPredicted RBP10.3□□□□□ -0.76
YBX3-215ENST00000544504 ACAP3Q96P50 834 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 ERGIC2Q96RQ1 377 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 RAD9AQ99638 391 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 PRRX2Q99811 253 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms