RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PHLDB2Q86SQ0 1253 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 MAPKAPK5Q8IW41 473 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 ARHGAP18Q8N392 663 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 AGPAT1Q99943 283 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 CENPKQ9BS16 269 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
SMG8-202ENST00000543872 FBXO6Q9NRD1 293 aaPredicted RBP13.46□□□□□ -0.25
SMG8-202ENST00000543872 LARSQ9P2J5 1176 aaKnown RBP13.46□□□□□ -0.25
SMG8-202ENST00000543872 MED24O75448 989 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 ESRRAP11474 423 aaPredicted RBP13.46□□□□□ -0.26
SMG8-202ENST00000543872 GPC5P78333 572 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 RASA3Q14644 834 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 ISLR2Q6UXK2 745 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 WHRNQ9P202 907 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 GLI3P10071 1580 aa13.46□□□□□ -0.26
SMG8-202ENST00000543872 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
SMG8-202ENST00000543872 C2orf71A6NGG8 1288 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 PDLIM1O00151 329 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 PGM1P36871 562 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 SBK1Q52WX2 424 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 PHLDB3Q6NSJ2 640 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 LVRNQ6Q4G3 990 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 RINLQ6ZS11 566 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 LCA5Q86VQ0 697 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 RIBC1Q8N443 379 aaPredicted RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 CFAP61Q8NHU2 1237 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 DNAJC1Q96KC8 554 aaKnown RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 ACP6Q9NPH0 428 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 ADGRA3Q8IWK6 1321 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 KCPQ6ZWJ8 1503 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 CCDC160A6NGH7 325 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 USP1O94782 785 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMG8-202ENST00000543872 CYP4A11Q02928 519 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 SLC45A4Q5BKX6 768 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 ZNF75CPQ92670 426 aaPredicted RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 NSL1Q96IY1 281 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMG8-202ENST00000543872 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 COL1A1P02452 1464 aaPredicted RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 ZNF34Q8IZ26 560 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 RUSC1Q9BVN2 902 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 VPS37BQ9H9H4 285 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 SAYSD1Q9NPB0 183 aa13.45□□□□□ -0.26
SMG8-202ENST00000543872 STX18Q9P2W9 335 aaKnown RBP13.45□□□□□ -0.26
SMG8-202ENST00000543872 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 A0A1W2PPM1 405 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 GOLGA8RI6L899 631 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 GGPS1O95749 300 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 FGFR1P11362 822 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 SERPINB3P29508 390 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 STAT4Q14765 748 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 SESTD1Q86VW0 696 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 SYT2Q8N9I0 419 aaPredicted RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 EYA3Q99504 573 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 KLF6Q99612 283 aaPredicted RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 INTS2Q9H0H0 1204 aaKnown RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 UBE2TQ9NPD8 197 aaPredicted RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 ARMCX1Q9P291 453 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 PDXKO00764 312 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 RAD21O60216 631 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 GAS8O95995 478 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 IL2RBP14784 551 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 ZNF24P17028 368 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 FMO5P49326 533 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 COG2Q14746 738 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 SIX1Q15475 284 aaPredicted RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 PDK4Q16654 411 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 TRABD2AQ86V40 505 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 SLC25A41Q8N5S1 370 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 MAML1Q92585 1016 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 WNT8AQ9H1J5 351 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 TAS2R1Q9NYW7 299 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 KDM3AQ9Y4C1 1321 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 ZWINTO95229 277 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
SMG8-202ENST00000543872 PLS3P13797 630 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 RRM1P23921 792 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 MAPK6Q16659 721 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 RHBDF2Q6PJF5 856 aa13.44□□□□□ -0.26
SMG8-202ENST00000543872 GSTA5Q7RTV2 222 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms