RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 C7orf25Q9BPX7 421 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 COL25A1Q9BXS0 654 aaPredicted RBP12.04□□□□□ -0.48
DDB1-222ENST00000543627 SLC39A2Q9NP94 309 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 SLC38A7Q9NVC3 462 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 CD207Q9UJ71 328 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 NUB1Q9Y5A7 615 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 A0A0B4J269 797 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 PODXLO00592 558 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 CNPP09543 421 aaKnown RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 SPATA31D3P0C874 917 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 BMP1P13497 986 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 EPCAMP16422 314 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 RPL17P18621 184 aaKnown RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 BRCC3P46736 316 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 SOX4Q06945 474 aaPredicted RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 USP41Q3LFD5 358 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 LEXMQ3ZCV2 418 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 FAM26FQ5R3K3 315 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 ARMCX5Q6P1M9 558 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 DCLRE1AQ6PJP8 1040 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 PRSS55Q6UWB4 352 aaPredicted RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 SPATA31D4Q6ZUB0 917 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 C12orf76Q8N812 135 aaPredicted RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 VN1R2Q8NFZ6 395 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 HVCN1Q96D96 273 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 KLHL5Q96PQ7 755 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 PPP1R10Q96QC0 940 aaKnown RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
DDB1-222ENST00000543627 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 HERC2P3Q9BVR0 1158 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 ST6GALNAC4Q9H4F1 302 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 TMEM206Q9H813 350 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 OLFML3Q9NRN5 406 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 EXOC1Q9NV70 894 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 TUBGCP4Q9UGJ1 667 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 SSX2IPQ9Y2D8 614 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
DDB1-222ENST00000543627 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.487e-6■■■■■ 28.7
DDB1-222ENST00000543627 TCHHQ07283 1943 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 FRMD3A2A2Y4 597 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 CLIC2O15247 247 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
DDB1-222ENST00000543627 GLP2RO95838 553 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 PIGRP01833 764 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
DDB1-222ENST00000543627 GUCY2FP51841 1108 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 POSTNQ15063 836 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 NAB2Q15742 525 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 ENOX2Q16206 610 aaKnown RBP12.02□□□□□ -0.49
DDB1-222ENST00000543627 KYAT1Q16773 422 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 CTC1Q2NKJ3 1217 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 KANK3Q6NY19 840 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 CASP10Q92851 521 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 CCDC47Q96A33 483 aaKnown RBP12.02□□□□□ -0.49
DDB1-222ENST00000543627 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
DDB1-222ENST00000543627 UROC1Q96N76 676 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 GOLPH3LQ9H4A5 285 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 CLEC1BQ9P126 229 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 CNTN3Q9P232 1028 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 STK39Q9UEW8 545 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 FAM50BQ9Y247 325 aa12.02□□□□□ -0.49
DDB1-222ENST00000543627 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 TEX28O15482 410 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 MEFVO15553 781 aaPredicted RBP12.01□□□□□ -0.49
DDB1-222ENST00000543627 MBTPS2O43462 519 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 TRAPPC3O43617 180 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 PPP1R37O75864 691 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 ZNF202O95125 648 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 KCNE1P15382 129 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
DDB1-222ENST00000543627 MCM4P33991 863 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 ARPP19P56211 112 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 ALCAMQ13740 583 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 UPP1Q16831 310 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 KMT5BQ4FZB7 885 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 RTP2Q5QGT7 225 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 RARS2Q5T160 578 aaKnown RBP12.01□□□□□ -0.49
DDB1-222ENST00000543627 KIAA0319Q5VV43 1072 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 ANKRD54Q6NXT1 300 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 DSTYKQ6XUX3 929 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 ZSWIM2Q8NEG5 633 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 BEST2Q8NFU1 509 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 TTPALQ9BTX7 342 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 PLEKHA5Q9HAU0 1116 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 USP25Q9UHP3 1055 aa12.01□□□□□ -0.49
DDB1-222ENST00000543627 CPSF3Q9UKF6 684 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms