RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CD44P16070 742 aaKnown RBP18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 OR1G1P47890 313 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 PLCB3Q01970 1234 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 SPAG1Q07617 926 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 SNRNP35Q16560 246 aaKnown RBP18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 EDRF1Q3B7T1 1238 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 CBWD2Q8IUF1 395 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 GDPD5Q8WTR4 605 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 KIF12Q96FN5 646 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 MTMR10Q9NXD2 777 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 DERAQ9Y315 318 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 MYO9BQ13459 2157 aa18.58■□□□□ 0.57
RABGGTA-203ENST00000543002 CASTOR2A6NHX0 329 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 XPOTO43592 962 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 LPXNO60711 386 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 CCNE1P24864 410 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 RPL13P26373 211 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 WNT7BP56706 349 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 SOX4Q06945 474 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 CCDC183Q5T5S1 534 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 JADE1Q6IE81 842 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 TMEM173Q86WV6 379 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 RDH13Q8NBN7 331 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 SPPL3Q8TCT6 385 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 C18orf25Q96B23 403 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 IGSF21Q96ID5 467 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 UROC1Q96N76 676 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 TSG101Q99816 390 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 COLEC11Q9BWP8 271 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 ALG13Q9NP73 1137 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 UBQLN1Q9UMX0 589 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 PRG3Q9Y2Y8 225 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 C2CD2Q9Y426 696 aa18.57■□□□□ 0.56
RABGGTA-203ENST00000543002 GRM6O15303 877 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 NFICP08651 508 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 CYP3A5P20815 502 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 NR2F2P24468 414 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 KRT17Q04695 432 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 UBE3AQ05086 875 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 LRRC63Q05C16 580 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 TMEM132DQ14C87 1099 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 SURF1Q15526 300 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 NT5DC4Q86YG4 428 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 BCL7CQ8WUZ0 217 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 DDX27Q96GQ7 796 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 TMEM169Q96HH4 297 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 GUCD1Q96NT3 240 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 CDX2Q99626 313 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 PAAF1Q9BRP4 392 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 LMAN2LQ9H0V9 348 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 GOLGA2P5Q9HBQ8 144 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 MARCH5Q9NX47 278 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 TUBGCP4Q9UGJ1 667 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 LZTS1Q9Y250 596 aa18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 PDCD11Q14690 1871 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-203ENST00000543002 RPL9P32969 192 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 PMS1P54277 932 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 CYP24A1Q07973 514 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 SPATA1Q5VX52 437 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 KLHL10Q6JEL2 608 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 EFCAB13Q8IY85 973 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 MLKLQ8NB16 471 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 RABGGTAQ92696 567 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 MFSD14AQ96MC6 490 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 PDE11AQ9HCR9 933 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 TMEM63CQ9P1W3 806 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 PUF60Q9UHX1 559 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 ANK1P16157 1881 aa18.55■□□□□ 0.56
RABGGTA-203ENST00000543002 TRIM49BA6NDI0 452 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 MAPK13O15264 365 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 POU3F3P20264 500 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 LRPAP1P30533 357 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 CASP4P49662 377 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 CLCNKBP51801 687 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 NLRP12P59046 1061 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 ADAM9Q13443 819 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 ADGRE1Q14246 886 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 PSMD6Q15008 389 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 UPP1Q16831 310 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 KLHL40Q2TBA0 621 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 CEP135Q66GS9 1140 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 DCLRE1AQ6PJP8 1040 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 FOXR2Q6PJQ5 311 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 DDX53Q86TM3 631 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 POF1BQ8WVV4 589 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 NELFBQ8WX92 580 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 GAS2L1Q99501 681 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 LMCD1Q9NZU5 365 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 FRMD4BQ9Y2L6 1034 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 TRANK1O15050 2925 aa18.54■□□□□ 0.56
RABGGTA-203ENST00000543002 BICDL2A1A5D9 508 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 F8W810 466 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 TMEM189-UBE2V1I3L0A0 370 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 PODXLO00592 558 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 CETN3O15182 167 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms