RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 NTHL1P78549 312 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 FOXK2Q01167 660 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
PTPN6-219ENST00000542848 UPP1Q16831 310 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 CD300LGQ6UXG3 332 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 ALKAL1Q6UXT8 129 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 ADSSL1Q8N142 457 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 FGF13Q92913 245 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 FGF14Q92915 247 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
PTPN6-219ENST00000542848 RPP25Q9BUL9 199 aaKnown RBP13.03□□□□□ -0.32
PTPN6-219ENST00000542848 KIFC3Q9BVG8 833 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 DDX19AQ9NUU7 478 aaKnown RBP13.03□□□□□ -0.32
PTPN6-219ENST00000542848 DLGAP2Q9P1A6 1054 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 DMXL1Q9Y485 3027 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 GRM5P41594 1212 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 GPC5P78333 572 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 PTGDRQ13258 359 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 GLRA4Q5JXX5 417 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 RSPO2Q6UXX9 243 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 ANKS3Q6ZW76 656 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 ITFG1Q8TB96 612 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 TOPORSQ9NS56 1045 aaPredicted RBP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 SLC38A7Q9NVC3 462 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 DNM3Q9UQ16 869 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
PTPN6-219ENST00000542848 CDY1Q9Y6F8 540 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 OTOGLQ3ZCN5 2332 aa13.02□□□□□ -0.33
PTPN6-219ENST00000542848 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 LAD1O00515 517 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 DCNP07585 359 aaKnown RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 IGFBP6P24592 240 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 NPTX2P47972 431 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 PEX3P56589 373 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 PRKCQQ04759 706 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 PABPC1LQ4VXU2 614 aaKnown RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 SPECC1Q5M775 1068 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 C1orf210Q8IVY1 113 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 C3orf58Q8NDZ4 430 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 ST13P5Q8NFI4 369 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 PJA1Q8NG27 643 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 DRC1Q96MC2 740 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 C17orf75Q9HAS0 396 aa13.01□□□□□ -0.33
PTPN6-219ENST00000542848 AVENQ9NQS1 362 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
PTPN6-219ENST00000542848 F5P12259 2224 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 KANSL1LA0AUZ9 987 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 E9PMD0 336 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 HIP1RO75146 1068 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 ABLIM3O94929 683 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 LMNAP02545 664 aaKnown RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 MCF2P10911 925 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 KCNE1P15382 129 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 PRPHP41219 470 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 BRCC3P46736 316 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 TOB1P50616 345 aaPredicted RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 PFKPQ01813 784 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 DMP1Q13316 513 aaPredicted RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 NBR1Q14596 966 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 C8orf34Q49A92 452 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 SLC44A4Q53GD3 710 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 KRT79Q5XKE5 535 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 SLC8B1Q6J4K2 584 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 RINT1Q6NUQ1 792 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 C1orf186Q6ZWK4 172 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 DAW1Q8N136 415 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 BORCS6Q96GS4 357 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 ACAP3Q96P50 834 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 DDX23Q9BUQ8 820 aaKnown RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 TIPINQ9BVW5 301 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 OSBPL6Q9BZF3 934 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 CDT1Q9H211 546 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
PTPN6-219ENST00000542848 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 HCFC1R1Q9NWW0 138 aa13□□□□□ -0.33
PTPN6-219ENST00000542848 GDE1Q9NZC3 331 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms