RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 RABGGTBP53611 331 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 IL2P60568 153 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 NUCB2P80303 420 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 SLC25A3Q00325 362 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 CD69Q07108 199 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 SEPT7Q16181 437 aaKnown RBP6.76□□□□□ -1.33
XRCC4-206ENST00000542685 CRB2Q5IJ48 1285 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 ZBTB41Q5SVQ8 909 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 LRCH2Q5VUJ6 765 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 AHI1Q8N157 1196 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 CDYL2Q8N8U2 506 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 IQUBQ8NA54 791 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 ZNF397Q8NF99 534 aaPredicted RBP6.76□□□□□ -1.33
XRCC4-206ENST00000542685 KIF18AQ8NI77 898 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 CHFRQ96EP1 664 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 CXorf56Q9H5V9 222 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 USP36Q9P275 1121 aaKnown RBP6.76□□□□□ -1.33
XRCC4-206ENST00000542685 JRKLQ9Y4A0 524 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 POLR3AO14802 1390 aaPredicted RBP6.76□□□□□ -1.33
XRCC4-206ENST00000542685 ABCC1P33527 1531 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 XDHP47989 1333 aa6.76□□□□□ -1.33
XRCC4-206ENST00000542685 NRXN1Q9ULB1 1477 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 SMTNL1A8MU46 457 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 HTATSF1O43719 755 aaKnown RBP6.75□□□□□ -1.33
XRCC4-206ENST00000542685 FAM20BO75063 409 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 RPS6KA4O75676 772 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 ALDH1A2O94788 518 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 TSPY4P0CV99 314 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 TSPY10P0CW01 314 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 GNAT2P19087 354 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 USP8P40818 1118 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 OCRLQ01968 901 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 FAM214AQ32MH5 1076 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
XRCC4-206ENST00000542685 JAZF1Q86VZ6 243 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 PIK3C3Q8NEB9 887 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 LARP4BQ92615 738 aaKnown RBP6.75□□□□□ -1.33
XRCC4-206ENST00000542685 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
XRCC4-206ENST00000542685 MNTQ99583 582 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 EPC1Q9H2F5 836 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.75□□□□□ -1.33
XRCC4-206ENST00000542685 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
XRCC4-206ENST00000542685 WDR33Q9C0J8 1336 aaKnown RBP6.75□□□□□ -1.33
XRCC4-206ENST00000542685 KLRG2A4D1S0 409 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 MTSS1O43312 755 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 IPO13O94829 963 aaKnown RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 MBD3O95983 291 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 PFKMP08237 780 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 PPP2R1AP30153 589 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 LSP1P33241 339 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 TPM4P67936 248 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 IRX1P78414 480 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 DPTQ07507 201 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 MTA1Q13330 715 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 TOB2Q14106 344 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 TTC31Q49AM3 519 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 GPR158Q5T848 1215 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 AMER2Q8N7J2 671 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 MDGA1Q8NFP4 955 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 OR2W6PQ8NHA6 318 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 PPP1R14CQ8TAE6 165 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 ST8SIA2Q92186 375 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 SYAP1Q96A49 352 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 KIF1BPQ96EK5 621 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 MFSD3Q96ES6 412 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 IKZF4Q9H2S9 585 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 PLAAQ9Y263 795 aa6.74□□□□□ -1.33
XRCC4-206ENST00000542685 DDX49Q9Y6V7 483 aaKnown RBP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.74□□□□□ -1.33
XRCC4-206ENST00000542685 KIF1BO60333 1816 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 ANKRD26Q9UPS8 1709 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 PRSS38A1L453 326 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 ATP8B1O43520 1251 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 FKBP9O95302 570 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 LY86O95711 162 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 IVLP07476 585 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 CT47B1P0C2W7 299 aaPredicted RBP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 HK1P19367 917 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 XPAP23025 273 aaPredicted RBP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 ADCYAP1R1P41586 468 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 HNRNPH2P55795 449 aaKnown RBP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 PHC1P78364 1004 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 SARNPP82979 210 aaKnown RBP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 NCBP1Q09161 790 aaKnown RBP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 HDAC1Q13547 482 aaPredicted RBP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 WDR43Q15061 677 aaKnown RBP eCLIP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 ZSCAN23Q3MJ62 389 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 C1QL3Q5VWW1 255 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 FKBP9P1Q75LS8 142 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 C11orf74Q86VG3 221 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 UNC5BQ8IZJ1 945 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 OR5M3Q8NGP4 307 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 STAG1Q8WVM7 1258 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 GAB3Q8WWW8 586 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 ANO3Q9BYT9 981 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 NRDE2Q9H7Z3 1164 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 PSD3Q9NYI0 1048 aa6.73□□□□□ -1.33
XRCC4-206ENST00000542685 SUFUQ9UMX1 484 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms