RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ODF2LQ9ULJ1 636 aa17.13■□□□□ 0.33
VPS33A-206ENST00000542310 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.13■□□□□ 0.33
VPS33A-206ENST00000542310 SMIM28A0A1B0GU29 152 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 SLC16A4O15374 487 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 N4BP1O75113 896 aaKnown RBP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 MAPTP10636 758 aaKnown RBP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 CLCNKBP51801 687 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 IER5LQ5T953 404 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 CEP57Q86XR8 500 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 ACAP3Q96P50 834 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 SMOC2Q9H3U7 446 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 KCNK12Q9HB15 430 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 PIDD1Q9HB75 910 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 LARSQ9P2J5 1176 aaKnown RBP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 ZFP37Q9Y6Q3 630 aaPredicted RBP17.12■□□□□ 0.33
VPS33A-206ENST00000542310 DOCK6Q96HP0 2047 aa17.12■□□□□ 0.33
VPS33A-206ENST00000542310 CACNA1HO95180 2353 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 PDGFBP01127 241 aaPredicted RBP17.11■□□□□ 0.33
VPS33A-206ENST00000542310 SPATA31D3P0C874 917 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 GBP2P32456 591 aaPredicted RBP17.11■□□□□ 0.33
VPS33A-206ENST00000542310 NCKAP1LP55160 1127 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 TCF15Q12870 199 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 CUL4AQ13619 759 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 RAB33AQ14088 237 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 SPATA31D4Q6ZUB0 917 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 ANKS3Q6ZW76 656 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 CALML4Q96GE6 196 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
VPS33A-206ENST00000542310 PODXLO00592 558 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 C8AP07357 584 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 PDCP20941 246 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 RPL9P32969 192 aaKnown RBP17.1■□□□□ 0.33
VPS33A-206ENST00000542310 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
VPS33A-206ENST00000542310 MRE11P49959 708 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 SOX4Q06945 474 aaPredicted RBP17.1■□□□□ 0.33
VPS33A-206ENST00000542310 MCL1Q07820 350 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 PPM1LQ5SGD2 360 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 CD300LGQ6UXG3 332 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 C3orf58Q8NDZ4 430 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 MYADMQ96S97 322 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 ANKFY1Q9P2R3 1169 aa17.1■□□□□ 0.33
VPS33A-206ENST00000542310 SFI1A8K8P3 1242 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 SYN3O14994 580 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 XYLBO75191 536 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 TKTP29401 623 aaKnown RBP17.09■□□□□ 0.33
VPS33A-206ENST00000542310 ABCD1P33897 745 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 UBA7P41226 1012 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 CLCN5P51795 746 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 OSTNP61366 133 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
VPS33A-206ENST00000542310 GET4Q7L5D6 327 aaPredicted RBP17.09■□□□□ 0.33
VPS33A-206ENST00000542310 ALYREFQ86V81 257 aaKnown RBP17.09■□□□□ 0.33
VPS33A-206ENST00000542310 ZMAT2Q96NC0 199 aaKnown RBP17.09■□□□□ 0.33
VPS33A-206ENST00000542310 MFSD1Q9H3U5 465 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 NOTCH4Q99466 2003 aa17.09■□□□□ 0.33
VPS33A-206ENST00000542310 CLDN3O15551 220 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 ADAM12O43184 909 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 GALR2O43603 387 aaPredicted RBP17.08■□□□□ 0.32
VPS33A-206ENST00000542310 MYBP10242 640 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 LAMP2P13473 410 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 ZNF131P52739 623 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 KYAT1Q16773 422 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 ARSHQ5FYA8 562 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.32
VPS33A-206ENST00000542310 SLC8B1Q6J4K2 584 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 SLC7A14Q8TBB6 771 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 PLIN2Q99541 437 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 REEP2Q9BRK0 252 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 PLEKHA5Q9HAU0 1116 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
VPS33A-206ENST00000542310 ANK1P16157 1881 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 ANHXE9PGG2 379 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 PIGRP01833 764 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 SRFP11831 508 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
VPS33A-206ENST00000542310 PLCG1P19174 1290 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 FSHRP23945 695 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 OR1D2P34982 312 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 BRCC3P46736 316 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 HTR4Q13639 388 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
VPS33A-206ENST00000542310 AXDND1Q5T1B0 1012 aaPredicted RBP17.07■□□□□ 0.32
VPS33A-206ENST00000542310 TMEM105Q8N8V8 129 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 RAD54LQ92698 747 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 ZBTB45Q96K62 511 aaPredicted RBP17.07■□□□□ 0.32
VPS33A-206ENST00000542310 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 WNT16Q9UBV4 365 aa17.07■□□□□ 0.32
VPS33A-206ENST00000542310 TSC2P49815 1807 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms